Chthonomonas calidirosea: CCALI_02828
Help
Entry
CCALI_02828 CDS
T02699
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ccz
Chthonomonas calidirosea
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccz03400
]
CCALI_02828
DNA repair and recombination proteins [BR:
ccz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCALI_02828
Archaeal homologous recombinant proteins
CCALI_02828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
NPV_P10
AAA_21
AAA_27
Motif
Other DBs
NCBI-ProteinID:
CCW36613
UniProt:
S0F071
LinkDB
All DBs
Position
3332736..3335864
Genome browser
AA seq
1042 aa
AA seq
DB search
MIPIRLSLKNFMSYGETPETLNFEGLHVACLSGENGNGKSALLDAITWALWGRTRIASQG
VSEDDLIRLGAQDMEVLFEFELNGQRYKVTKKRKRGGGSEWHLAGWSGNDWISLSGTSQR
ETEKRLTQLLSMEYETFLNSAYLQQGRAEEFTRQTPDKRKQVLGQILGLERYDRLQELAR
EQVRDAKAQIQEIEGEINVLKLEANDLQRRKEQLQEVQASLERLREELAQKEREHAQLQT
KLMELQTLATQVREQARTLAEQRADLQTRRAELAKVENQIEEMETILGQSEAIVRDYQSW
QSMKQKADSLEPQIKAYYETSNEKLRLEAELAHEEQELRHSIDAKGREIEQLEKEIEQRN
RLVAEIQNLNAWIESNKDVLVRYDQLVQLQQKLERQEEALQAECDAIKQLESDYNLARQD
LQHQIASKRRELAQLQKSLDARNRILADIANLKQQLAQEEQLEAKFQEVRKALEEATEKY
QMLKSQRDRLNQNIKEINEILPILQQAGASCPVCASELNEEKRARLVASQEAKSKQYAEE
LKSVLQQGTELKERKKQLEETQQHLEGQRRQLIEQKARLQELQEQQRQYATIEEEIQKAQ
TELADLEATEADDALRPLFSRLENAQELLQRLARFDILTARELVARRQAVEKKLDELRQQ
ERENREVIEALQKQKEEYAKRAATLDSLQARLKDYHEVDAKLKQARDERNSLQQKLEKGD
FGHPIRAKLTIAQSELARLKKVHEEYEQVKRQVEALEPARERFRLLESARAEIEPMRKER
QRLNHLIAEKQKQVQDLEAEHAKKCLLLEQIEDVQRQCEAARLALDEVRQRSEERKLEEG
QCAEAVRRAEMGALELRKKEAALKAWKERQSLYEHLDAAFGRKGVQALIIENTLPELEEE
ANEILRSLTDGKMQLRFEVVRPTKSKRSEIETLDIRITDDMGTRPYELFSGGEAFRISFA
IRIALSRLLARRSGTRLQTLIMDEGFGSQDGKGRERLVEAIEAIKDDFEKILVITHMEDL
KDAFAHRIEVTKDERGSHIHLV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgattcggttgagtctgaaaaactttatgagctatggggagacgccggaaacg
ttgaacttcgaggggcttcatgtggcctgtctatccggtgaaaacggcaatgggaaaagc
gccttactcgatgccattacctgggcactttgggggcgcacgcgcattgcctcgcagggg
gtaagcgaggacgatctcattcggctgggcgctcaagatatggaggtgctctttgaattc
gagttaaatgggcagcgctataaggtgaccaaaaagcgtaagcgtggcggtggcagcgaa
tggcatcttgccggttggagtggaaatgactggatatcgcttagcggaacctctcaaagg
gagacagaaaagcgcctcacccagctgcttagcatggagtatgagacgtttttgaattcg
gcctatttgcagcaggggcgcgcagaggagtttacccggcagactcccgacaagcgcaag
caggtgctagggcagatccttggcctcgagcggtacgaccggctccaagagttggcacgc
gagcaggtgcgggatgcaaaagcccagatacaggagatcgagggggagataaatgtctta
aagctcgaggcgaacgatctgcagcgacggaaggagcagttgcaagaggtacaagccagc
ctggaaaggttgcgagaggagctggcccaaaaagagcgagaacatgcgcagctgcaaacg
aagcttatggagttgcagactttggccacgcaggtcagagagcaggcgagaacacttgcc
gagcagagggccgatttgcaaacgcgaagggctgagcttgccaaagtcgaaaaccaaatt
gaagagatggagactatcttagggcagagcgaagcgatcgtgcgcgactaccagtcgtgg
caaagtatgaagcagaaggccgattcccttgaaccacaaatcaaagcatattatgagacc
agcaacgagaagctgcgactagaggccgagctagcgcatgaggagcaagagttgcgacat
agtattgacgcgaaggggcgtgagatagagcagctcgaaaaggagatcgaacagaggaat
cgattggtggccgaaattcaaaatttaaacgcttggatcgagtcgaacaaggatgtgctg
gtgcgctacgatcagcttgttcaactgcagcaaaagctggagcgacaagaagaggctcta
caggccgagtgcgacgcgatcaagcagcttgaaagtgactacaatttggcacgacaggac
ctgcaacaccagatagcctcgaagcgacgagagcttgcccaactgcaaaagagcctcgat
gctcgcaataggattcttgccgacatcgcaaatttgaaacaacagttagctcaagaagag
cagcttgaagcgaagtttcaggaggtgcggaaggcgcttgaggaggcaacggaaaaatat
cagatgctaaagtcgcaacgcgatcgtttaaatcagaatataaaagagattaatgagata
ttgcctatcctgcaacaagctggagccagttgtccggtatgcgcttcggagctgaatgag
gagaagcgggcgcgactcgtggcttcacaggaggcaaaatcgaagcagtatgcggaggaa
ctcaaatcagtgctccaacagggcactgagctgaaagagagaaaaaagcagcttgaggag
acacaacaacacctcgaggggcagagacgccagctcattgagcagaaggcgcgcctacag
gagctgcaagagcaacaaaggcagtacgccaccatagaagaagagatacagaaagcacag
acggagttggccgatcttgaggcgacggaagcagatgacgccctgcgtcctctgttttca
cggcttgagaatgcgcaggaacttttgcagcgcctcgcccgtttcgacatccttactgcg
agggaactagttgcacgtcgtcaagcggtggaaaagaaacttgacgaactacgacaacag
gagagagagaaccgagaggtgatagaggcactgcagaagcagaaggaggagtacgcaaaa
cgtgccgctactttggactccttgcaggcgcgtttgaaggactaccatgaggtagatgcg
aagttgaagcaggcacgcgatgaacgcaacagcttgcaacaaaagctcgaaaagggagat
tttggtcatcccattcgggcgaagttaacaatcgcacaaagcgagcttgcccgactgaag
aaagtccatgaggagtacgaacaagtgaagcgacaggtggaagctttggagccggcccgt
gaacgttttcgcttgttggaatccgcacgtgccgagattgaaccgatgcggaaggagcgg
cagcggctaaaccatcttatcgctgagaagcagaagcaggtgcaggatttggaggcagag
catgccaaaaaatgcctcctgttggaacagattgaggatgtgcaacgccagtgcgaggcc
gctaggctagcgctggacgaggttcgccaacgttctgaagagcgaaagctcgaagagggg
cagtgtgccgaagctgtgcgacgtgctgagatgggcgcactggagttgagaaagaaagag
gctgccctaaaggcttggaaagagcggcaaagcctctacgagcatttagacgccgccttt
ggaagaaaaggagttcaagcgcttattattgaaaacacgctgccggagttggaggaggag
gccaacgagattttgcgctctttgaccgatggtaaaatgcaactgcgttttgaagtggtg
cgcccaacaaaatccaaacgcagtgagatcgaaacgctcgatatccgcatcacggacgat
atggggacacgaccctacgagctgtttagtggaggagaggccttccgcatcagtttcgcc
atccgcatcgccctctcgcgattgcttgcccgccgtagtgggacgcgtttgcaaaccttg
attatggatgaggggttcggatcgcaggatggaaaggggcgcgagcgcttggtggaggcc
atcgaggctatcaaggacgattttgagaaaattttggtgataacccacatggaagatctg
aaggatgcctttgcacatcgtattgaagtaacaaaagatgaaagaggctctcatatccat
ttagtgtag
DBGET
integrated database retrieval system
