Chthonomonas calidirosea: CCALI_02891
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Entry
CCALI_02891 CDS
T02699
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCALI_02891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccz03021
]
CCALI_02891
03400 DNA repair and recombination proteins [BR:
ccz03400
]
CCALI_02891
Enzymes [BR:
ccz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCALI_02891
Transcription machinery [BR:
ccz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCALI_02891
DNA repair and recombination proteins [BR:
ccz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCALI_02891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CCW36676
UniProt:
S0EXQ0
LinkDB
All DBs
Position
3391120..3392184
Genome browser
AA seq
354 aa
AA seq
DB search
MEITLPNIQTLEKSRTYGKFVVEPLERGYGVTLGNSLRRVLLSSIPGAAITYVKIDKVLH
EFDTIPGVKEDTTELLLNLKELHIKVYHDGSEGRKSEPRKLRIDVHGEGVVTGADVICPE
DVEVVNPEVYLATLSDENAHLSMEMEVEIGKGYVLPDRQERRSQMGIGVIAVGAAFTPVR
KVNYTVEATRVASDTSYERLILEIWTNGTIFPDAALREAARILNRYFNLFAEYEDGGLPL
SYEEGPLSNPEAIPHVRIEELDFSVRTYNCLKKAGILTIADLVRYNEEELMQIRNFGRKS
LDEVRERLAIYGLHLKGETALPPGTKRPTSDTGTEDEENGEDEEEEATAGAEAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaccctgccgaacatccagacgctcgaaaagagtcgaacttacggaaagttt
gtcgtcgagccgctggaacgtgggtatggggtaacgctcggaaactccctgcggcgtgtg
ctcctatcgtccattccgggagctgccatcacctacgttaaaatagataaggtgctgcac
gagttcgacaccattcccggtgtgaaagaggacaccacagagctgttgctcaaccttaag
gagctgcatataaaagtctatcacgatggcagcgagggacgaaagagcgagccgagaaag
ctgcgcattgatgttcatggagaaggggttgttacaggggccgacgtgatctgcccagaa
gacgttgaggtagtaaaccctgaggtttatcttgccaccctctccgatgagaacgctcat
ctctctatggagatggaagtggagatcggaaaaggctatgtgcttcccgatcggcaggaa
cgtcgcagccagatggggataggtgtcatcgccgtaggtgcggcctttacaccggttcgt
aaggtgaactacactgtggaagcgacgcgagtggcctctgatacgagctacgagcgcctt
atcctagagatatggacgaacggaacgatcttccccgatgccgcccttcgtgaggccgcc
cgtattctcaatcgctacttcaatctcttcgcagagtatgaggacggtggcttgcccctc
tcttatgaagaaggccccctgtccaatcccgaagcgataccccatgtacgtatcgaagag
ctcgatttctctgtacgtacctataactgcctgaaaaaagccggtattctcaccatcgcc
gacctcgtgcgctacaacgaggaagaactcatgcagattcgtaacttcgggcggaaatcg
ctcgatgaagtgcgcgagcgtcttgccatctatggcctgcatctaaagggggagacggct
ctgcctccgggtaccaaacgccccacctccgataccggtacggaagatgaggagaacggg
gaggatgaggaggaagaggccactgccggcgctgaggcagaatag
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