Corynebacterium diphtheriae HC04: CDHC04_0452
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Entry
CDHC04_0452 CDS
T01696
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cda
Corynebacterium diphtheriae HC04
Pathway
cda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDHC04_0452 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cda03021
]
CDHC04_0452 (rpoA)
03400 DNA repair and recombination proteins [BR:
cda03400
]
CDHC04_0452 (rpoA)
Enzymes [BR:
cda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDHC04_0452 (rpoA)
Transcription machinery [BR:
cda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDHC04_0452 (rpoA)
DNA repair and recombination proteins [BR:
cda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDHC04_0452 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEX80445
LinkDB
All DBs
Position
465376..466392
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEECVDSARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMYLRKEGAGVITAGDIEPPAGVEIHN
PDLHLATLNEQGRLDIEMIVERGRGYVPATLYSGPAEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSMAPRDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYGMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPTQLDGYDAATGDYIDTDPEETE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgcccaacccttaccgaggaatgcgtcgattccgctcgctcgcgc
ttcgttatcgagccacttgagcctggcttcggctacaccctaggtaattcgctgcgtcgt
accctgctttcgtccatcccaggcgcagcagtgaccagcatcaagattgatggtgtgctc
cacgagttcaccaccatcaacggtgtaaaggaagatgtctccgacatcatcttgaacatc
aagggccttgtgctttcttctgactccgatgagccagttgttatgtacctgcgcaaggaa
ggcgctggcgttattactgctggtgacatcgagccaccagcaggcgtggagattcacaac
ccggatctgcacctcgcaacccttaatgagcaggggcgtctggacatcgagatgattgtt
gagcgtggccgtggctacgttccagcaactctttactccggcccagctgaaatcggccgt
atcccagtcgaccagatttactccccagtattgaaggtcagctacaaggttgaagctact
cgtgttgagcagcgcaccgactttgacaagctgatcatcgacgtggaaaccaagaactct
atggctccacgtgacgcactcgcgtctgcaggcaagacccttgttgagctgttcggcctc
gcacgcgagctgaacaccgcagccgaaggcatcgagatcggaccttctccacaggagacc
gagtacatcgctgcttacggcatgccaatcgaggatctgaacttctctgttcgttcctac
aactgcctgaagcgccaggaaatccacacggtcggtgagctcgcagagtgcaccgaatcc
gatctgctggatatccgcaacttcggtcagaagtcgatcaacgaagtaaagatcaagctc
gctggtttgggtttgaccctcaaggatgctccagaggacttcgatccaactcagctcgat
ggctatgacgctgcaaccggcgactacatcgacacggatcctgaagaaaccgagtaa
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