Corynebacterium diphtheriae HC04: CDHC04_1388
Help
Entry
CDHC04_1388 CDS
T01696
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cda
Corynebacterium diphtheriae HC04
Pathway
cda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDHC04_1388 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cda03019
]
CDHC04_1388 (pnp)
03016 Transfer RNA biogenesis [BR:
cda03016
]
CDHC04_1388 (pnp)
Enzymes [BR:
cda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDHC04_1388 (pnp)
Messenger RNA biogenesis [BR:
cda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDHC04_1388 (pnp)
Transfer RNA biogenesis [BR:
cda03016
]
Prokaryotic type
tRNA degradation factors
CDHC04_1388 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
OB_cyt-4
KH_KhpA-B
KH_NusA_1st
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEX81379
LinkDB
All DBs
Position
complement(1469664..1471931)
Genome browser
AA seq
755 aa
AA seq
DB search
MSTKPSNVVFNIDEEFGITEAIATIDNGDFGKRTIRFETGQLARQADGSVTTYLDDDTML
LATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVVITVLSVNPQDMYDVVAINGASAATQLSGLPVSGPVGGVRMALIADD
AHPKGQWIAFPTHEQHEQALFELVVAGRIVSKKQGKKTVDDVAIMMVEAGATEQVVDRVK
AGAPAPTESVVAEGLEAAKPFIEVLCRAQAGLAERAAKETQEFPLFPPYTDVVYDAVEKK
VSKKLRSLLTIKSKQDRDEATNAYMEEIEADLIAQLGSDDEAAASKAIRAAYNAVMKKIV
RHMILTEHFRIDGRGVTDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQQI
DSLTPATSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVIPSREEFPYAI
RQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDI
LGAEDAFGDMDFKVAGTRQFITALQLDTKLDGIPSEVLAQALSQANDARNTILDTMAEVI
ETPDEMSDYAPRITAITVPVNKIGEVIGPKGKTINSITEETGANISIEEDGTVYVSATSG
AAAEAAIEKINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGGGKRI
EKVEDVVNVGDKLEVEILDIDNRGKISLAPVKNED
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacaaagccttccaacgtcgtctttaacattgacgaggaatttggaatcaccgag
gcaatcgcaactatcgataacggtgattttggaaagcgcaccatccgttttgagaccggc
cagttggcacgccaagcagacggatcagttacaacctatcttgacgacgacacgatgttg
ttggcaacgaccacagcatctaatcagccacgtgaaggattcgatttcttcccgctgaca
gtcgacgttgaagagcgtatgtacgcagctggcaggatcccaggatcgttcttccgtcgt
gaaggccgcccttccaccgaggcaatcttggcttgccgtttgatcgaccgcccgttgcgc
cccacctttgttaagggactacgtaacgaggttcaggtagttatcactgttctttccgta
aacccgcaagacatgtacgatgtcgtggcaattaacggtgcctctgcagcaactcagttg
tctggtttgccggtttctggtcctgttggcggtgtccgaatggcactgatcgcagacgat
gctcaccctaaggggcagtggattgctttccctactcatgaacagcatgaacaagcactc
tttgagctcgtcgtagcaggacgtattgtctcgaagaagcaaggtaaaaagaccgttgat
gatgttgccatcatgatggttgaggctggtgctactgagcaggttgtagatcgagttaaa
gctggagccccagctcctacagaatctgtggttgcagaaggtcttgaggctgctaaacca
ttcattgaggttctttgccgtgcgcaggctggattggccgagcgtgcagccaaggaaacc
caagaattcccactcttcccgccatacactgacgttgtttacgatgcagtggagaagaag
gtttctaagaaactgcgttcgttgctcacgatcaagtccaagcaagatcgtgatgaggca
accaatgcttacatggaagaaatcgaagcagatctgattgcccagctcggatctgatgat
gaggcggctgcatctaaggcaattcgtgcagcatacaatgctgtaatgaagaagattgtc
cgtcatatgatcttgacggaacacttccgcatcgacggtcgcggtgtcaccgatattcgt
gatttaggtgtggaagttgacctcatcccacgcgctcatggttcgtccttgttcgagcgt
ggcgagactcagattctgggtgtgaccactctcgatatgctcaagatggagcagcagatc
gattcattgactccagcaacttcgaagcgttatatccaccactacaacttcccaccgtat
tccactggtgaaactggccgtgttggctcacctaagcgtcgcgaaattggccacggtgct
ttggctgagcgtgcactggttcctgtgatcccaagtcgtgaagagttcccttatgcaatc
cgacaggtgtctgaggctttgggctcgaacggttctacctcgatgggctctgtatgtgcg
tccaccttgtctttgtacaacgcaggtgtaccgttgaaagctcccgttgctggtattgcg
atgggcttggtgtctgatgaagtagacggtgagactcgttatgtcgctttgactgacatc
ttgggtgcagaagacgcctttggtgatatggacttcaaggttgctggtactcgccagttc
attaccgctttgcagctagatacaaagcttgatggcattccttctgaggtgcttgctcag
gcactatcccaggcgaatgatgcgcgtaacaccattttggatacgatggcagaagtaatc
gaaactccagatgagatgagcgactacgcgccacgtattactgcgattaccgttccagtg
aacaagatcggtgaggttatcggtccaaagggcaagaccattaactctattaccgaagaa
actggcgccaacatttctattgaagaagacggcacagtttatgtttcggccaccagcggt
gctgctgcagaggctgcaatcgaaaagattaacgctatcgctaacccacagctgcctaag
gtcggagagcgtttcctcggcactgtcgtaaaaaccactgcatttggtgctttcgtatcc
ttgctgccaggacgcgacggactggttcacatctccaagcttggtggtggcaagcgtatc
gaaaaggttgaagatgtagtcaacgtgggagataaactcgaggttgaaatcctagatatt
gacaaccgtggcaagatttccttggctccagtgaaaaacgaggactaa
DBGET
integrated database retrieval system
