Corynebacterium diphtheriae HC04: CDHC04_1485
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Entry
CDHC04_1485 CDS
T01696
Name
(GenBank) putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cda
Corynebacterium diphtheriae HC04
Pathway
cda03030
DNA replication
cda03430
Mismatch repair
cda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDHC04_1485
03430 Mismatch repair
CDHC04_1485
03440 Homologous recombination
CDHC04_1485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cda03032
]
CDHC04_1485
03400 DNA repair and recombination proteins [BR:
cda03400
]
CDHC04_1485
Enzymes [BR:
cda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDHC04_1485
DNA replication proteins [BR:
cda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDHC04_1485
DNA repair and recombination proteins [BR:
cda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDHC04_1485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
BRCT
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
AEX81476
LinkDB
All DBs
Position
1580518..1581864
Genome browser
AA seq
448 aa
AA seq
DB search
MSGLIPAHGLSFHVDASTLTGQSSLLRASLGLDDVHLQVSAITEVKSVFVADAFDRGLVT
VTADKEIAIWFPPNSATEQELFVRTLSAAMNGDGPIPQPVPHLDFVAVDVETANSDWGSI
CQIGAAKVRDGHVVETKEWLCTPPGDLNSFDEANIAIHGITADIVATAPSFAECYDQFAD
FAGDLPLAAHNAQFDMTAFLRATQAADIRLRTTNFGCSLAAARAAHLPIANHKLPTVSQH
LHVELRNHHNACADAEACAGILIALTQRLNTEITDFASAFKMLGFHTGQLSDARVYPVLK
VRGASSAPALPDSAAPAIQTPPAEKPRKATKAARAPWSKVATPETIPDPNPDADPQGRLF
GQSVTLSGDFAPYDKGELWAGIANQGGIIGKNVTKKTTILVCGPWDKPTSKQKRAEELRA
KGQEIDLWTQEDLFAQLGLNPEDEQPPF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcctcatcccagcacacggtttaagcttccacgttgatgcctcgacgcttaca
ggtcagtcgtcgctactgcgtgcaagcctagggctcgacgacgtccacctgcaggtttcc
gccatcacagaagtaaaatcggtgtttgtagctgacgcctttgaccgcggactagttact
gtcactgccgacaaagaaattgctatttggttcccgcctaatagtgcaaccgaacaagaa
ctttttgttcgtacactgtcagcagcaatgaatggcgatggccctattccccaacccgtg
ccccacttagattttgtggcggtcgatgtagaaacagctaatagcgactggggttctatt
tgtcagatcggtgcggctaaagtacgagatggtcacgttgtagaaaccaaagagtggcta
tgcaccccaccaggcgatttaaattccttcgacgaagctaacatcgccattcacggcatt
accgcagatatagtcgcaactgcgcctagcttcgctgaatgctacgaccaatttgctgac
ttcgcaggagatcttccgctggctgcacacaacgcacaatttgatatgactgctttcctg
cgtgctacccaagctgctgacatccgcctacgcaccaccaattttggttgttctctcgct
gccgcgcgcgcagcacacctacctattgcgaatcataaacttcccactgtctcacaacat
cttcatgttgagcttcgaaatcaccataacgcctgtgcggatgccgaagcctgtgccgga
attctcatcgctcttacgcaacgtctgaacaccgaaatcactgattttgcctccgcattt
aaaatgctagggttccatactggtcaattatccgacgctcgtgtgtatccagttctcaaa
gttcgtggtgcctcgagcgctccagctttacctgattccgctgcccctgctattcaaacc
ccaccagcagaaaaaccccgcaaagcaaccaaagcagcgcgggcgccgtggtcgaaggtg
gcaactccagaaacaatccctgaccctaatcctgatgccgatcctcagggccggctcttt
gggcaatctgtcacgcttagtggcgatttcgccccctacgacaaaggcgagctgtgggct
ggaattgcgaaccaaggaggcattattggcaaaaacgtcacgaaaaagacaaccatcctt
gtatgcggcccatgggacaaaccgacttctaaacaaaaacgtgccgaagaactgcgcgcc
aaaggccaagagattgacctatggactcaagaagacctgtttgcgcaactaggtcttaat
cccgaggacgaacaaccaccgttttaa
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