| Entry |
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| Symbol |
pks13
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| Name |
(GenBank) polyketide synthase involved in mycolic acid biosynthesis
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| KO |
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| Organism |
cda Corynebacterium diphtheriae HC04
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| Pathway |
| cda01110 | Biosynthesis of secondary metabolites |
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| Module |
| cda_M00887 | Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM |
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| Brite |
KEGG Orthology (KO) [BR:cda00001]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
CDHC04_2105 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:cda01004]
CDHC04_2105 (pks13)
Lipid biosynthesis proteins [BR:cda01004]
Polyketide synthase
Modular PKS
CDHC04_2105 (pks13)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2281225..2285985)
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| AA seq |
1586 aa
MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLG
VKLDATIAYEYPTIAALSQRLIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHD
IDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTDLRGGYLDDIAFFDAEFFGLS
PLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH
PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGV
NIMAAPFVSTSFGELGVFSPTGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILA
VIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPRYVDYVEAHGTGTILGDPIEA
TALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN
RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPS
LIDPDNPNAVTLEVSGLLPSRRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVV
TAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSGFGSQHRLMAKKLLGVSEEFA
QRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV
GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGEKSLPEDQLGAMAVVEFSVEALEEF
RQQNPEFSGVEPAVYAAPGMTTVGGPREAVIKLVEKLEAEGKFARLLNVKGAGHTSALDP
LLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTTDYWLRCTRQSVWFQDATEQA
FAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG
APISFDYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGALAFTMVADQV
PSTAALIDATVTSVQPGAQVLAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQ
IAEAFATTLSAPHTPAAEAAPDSVVGTVVEVEAPEVPDSLMWDPATETVEERLRAIVSEA
MGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL
VADRGATQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLP
EITEEQAREIAERLTERAGVAMSVEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPE
GSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERREGSLEERAAAYLDEIKQYSDG
LPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA
FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRI
LDRMDMQRWANVKIPVMLFRAERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDH
LAVVDEPEIGKVGVALTNRIEQLQGK |
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| NT seq |
4761 nt +upstreamnt +downstreamnt
atggattctcgcgtcacggctatgaccacttcgcagctacgcacatggctgcgagattgg
gtcctagccactacaggtttgcccgcggaagaaatcaccgatgataaaccgatgcaatct
tttgggctttcctcccgtgacgtggtgctactttcaggggaattagaaaacctcttgggc
gtcaaactcgacgcgaccatcgcttatgagtacccgacgatcgcggcgctgagccagcgt
ctgatcgagggtgctcctgaggctgccacccctgtctttacacagcgggaaactcagcgc
accgcgtcccatgacatcgctatcgtgggtatggctgcccgttaccctggcgcacatgac
atcgaccaaatgtggtcgatgctcattgagggccgcgacggtatcaccgacctgccggag
ggccgttggtcggaatatgctgctgacgaggtcaccagcgaaaaaatagctaataccgat
ttacggggcggctacttagacgacattgctttctttgatgcagagttctttggactatct
ccgctggaagcagtcaatatcgatccgcagcagcgcatcatgttggagctgacatgggag
gctcttgagcacgcgcacattccggcatcctcgcttaagggcaagccggtgggtgtgttc
ttcggttcttccaataatgactacggcatgttgatcggtgctgatccagccgagtcgcac
ccctatgcgatgacgggtaatgccagctcgattgtggctaaccgtgtgtcctatgccttc
gacttccgtggcccgtcggtaagcgtggatacggcgtgctcctcgtcgctggtatcggtc
caccaagcggtgcgtgcactgcgtgagggcgacgctgatgttgctgtctccggtggcgtg
aacatcatggcggcaccattcgtgtctaccagctttggcgaacttggcgtgtttagccca
acgggcaagatccacgcgttttccgacgacgccgatggcttcgtgcgttccgacggcgcc
ggcgtgctcgtgctcaagcgcgttgaggacgcggtcgccgatggcgataccatccttgct
gtgattaagggctccgcggtgaactccgacggacactccaacggtctgaccgcccctaat
ccagacgcacaggtcgatgtgctgcagcgcgcttacgccgacgctggtattgacccacgc
tacgtggactacgtggaagcacacggtaccggcaccatcttgggcgaccccattgaggca
accgcactcggtaaggtcctaggccctggccgtgacgcagcaacccctactttgctgggt
tctgctaagaccaactttggtcactccgaatcggctgctggcgctgcgggcctgatcaag
gtggtgttgtcgatgatgaacaacacgctgccagcgtccctgaatttcgctggtccgaac
cgctacgtcgattttgatgccgagcacctcgaggtcgtggaagatccacgcgaatggcct
gagtattccggcaagaagatcgccggtgtgtccggattcggtttcggcggaaccaatgcg
cacgttgtgctgagctcgtatgagccggcggctgatgtggaacgtcgtcacgctccgagc
ctgatcgacccagacaacccgaatgctgtcacccttgaggtgtcgggattgctgccgtcg
cgacgtcgtgaagcagccgccgcgctggccgacttcctcgaaggtcgccccgacagcgac
ctgcccaaggtggcgcgctcgaccgcaaagcgcaaccatggccgctcccgcgctgtggtc
acagcagaaaccactgaagaggccgtcaaacgcctgcgtaccgttgctgaaggcaagacc
gccatgggtatcgcagttgccgacgcccccagcaacgcacccgtgtttgtttactccggc
tttggctctcagcaccgcttgatggccaagaagctgctgggcgtttccgaggagttcgcg
cagcgtatcgcggagctcgacgagctggtggtttttgaggccggctggtccatgctggac
atcatcaccaacgatgaggaaacctacaccaccgaaaccgcgcaggtcaccatcactgcc
atccagattgcactgacagatctgctggcttcctttggtgccaccccagcgggtgttgtg
ggcatgtcgatgggtgagatcgctgcggcctacgccgccggcggcttgtctgatcgcgat
gcgatgaccattgctatccaccgtgctcgtttgatgggcgagggcgaaaagtcactacct
gaggaccaactcggcgctatggccgtggtggaattctccgtggaggcgctggaggagttc
cgtcaacaaaacccagagttcagcggtgtggagccagccgtgtatgcagcccctggcatg
accactgtgggtggcccacgtgaggccgtgatcaagttggtggaaaaacttgaggcagag
ggcaagtttgcgcgtttgctcaatgtgaagggcgcaggccacacaagtgctttggatccg
ctgttgggtgagctcgcagctgaaacctcgatgattgagccgaaaccactgcgcattccg
ctgtatagctcggtggatcgcgcgactgtatatcctgtcggttcggtggtgcacaccacc
gattactggttgcgttgtacgcgtcagtcggtgtggttccaagacgcaacagagcaggcg
tttgcgcatggagccatgatgctggtggagatttctccgaatcctgttgcgctgatgccg
atgatgaacaccgcctttagtgttggtaagtcggatgcgcagttgttgtttgcgttgaaa
cgcaaggtggacgaggtggcgtcgatacgcgacctgttggccaagatttatgttacgggc
gcgccgatttccttcgactatggcgatggggagattattcctgcgccgcatattccatgg
aagcgccagcattattggacgtccgcgcggccgtcgtcaagcaatcgtgttgcgatgccg
ggcacgaaggttacgctgccaggtggcgcgctggcgtttacgatggtcgccgatcaggtg
ccgtccaccgcagcgcttatcgacgctaccgtcacctccgtacaaccaggcgcgcaggtg
ctcgcgatttctgaaaccgcgacgctgcccgcaaccggtgagctgaccacggttgctacc
ccgaatgttggcggtgtggcagtggtggtttaccgcgtgattgacggccaaacccagcag
atcgccgaggcatttgccaccacgcttagtgccccgcataccccagccgctgaggctgct
cctgattcggtggtaggcacagtagttgaagtagaagccccggaggtgcccgatagcctg
atgtgggatcccgccacggagactgtggaggagcgcctgcgcgctatcgtttctgaggcg
atgggctatgacgttgcggatcttccccgcgaactgccactgatcgatctgggcttggac
tccctgatgggcatgcgcattaagaaccgtgtggagcatgactttcagattccgccgctg
caggtacaaaccctgcgcgatgcttctgttgcagacgtggttgcccttctggaggaactc
gttgccgaccgtggcgcaacccagcccgccgaaactgaaatcgctatcgagcacactgct
accgccgcggaatcccatgaggtgggcgtggcgccacgtgatgcttccgagcgtttggtc
tttgctacatgggccggtattacaggggctgcggcagctggggtgaccagcactttgccg
gagatcactgaggagcaggcacgagaaatcgcagagcgccttacagagcgtgccggtgtt
gcgatgtctgtggagcaggtgcagcaggcggaaacgcttgaacctttggccaacattgtg
cgcgagggattagaaaccgatgtggagggcaacatccgtgtgctgcgtgcccgccctgag
ggttctacgcagccagctgtgttcatgttccacccagctggcggtagttccgtggtgtac
cagccactgatgcgtcggttgcctgcggacgttcctgtctacggtgtggagcgtcgtgaa
ggctcgttagaggaacgcgccgcagcttaccttgatgagatcaagcagtactccgatggc
ctgcccatcattttgggcggttggagcttcggtggcgcgttggcttatgaggtggcttac
cagctgcaggattccgacgtggagatcgcaacgattgctttgctggacaccgtgcagcct
gcgcatttggcgcctgatactaaggaagaaacggttaagcgttgggagcgctactcggca
tttgctaagaagacctatggtcttgatttcccagtgccctatgagctgctggaaaccgct
ggtgaagatgcgctattggcgatgatggcggagttcttgtccaccactgatgctacagag
cacggtttgtcggcgggtgtgctggagcaccagcgtgcttcctttgtagacaaccgcatt
ttggatcgtatggacatgcagcgctgggcaaatgtgaagattccggtgatgttgttccgt
gctgagcgtatgcatgatggggctattgagctggaacccgcgtacgctgagattgagcct
gatggcggatggtcggctatcgttgaggatttggtgatcatccaactatctggcgaccac
ctagcagtggtggatgagccggagatcggtaaggttggtgtggcgctcaccaacaggatt
gaacagctacagggtaagtag |
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