Chryseobacterium daecheongense: MUU74_00245
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Entry
MUU74_00245 CDS
T08680
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUU74_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdae03019
]
MUU74_00245
03009 Ribosome biogenesis [BR:
cdae03009
]
MUU74_00245
Enzymes [BR:
cdae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUU74_00245
Messenger RNA biogenesis [BR:
cdae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUU74_00245
Ribosome biogenesis [BR:
cdae03009
]
Prokaryotic type
rRNA helicases
MUU74_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOU98416
LinkDB
All DBs
Position
complement(42855..44543)
Genome browser
AA seq
562 aa
AA seq
DB search
MNLFTESNLSPDILKAIGEMGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQLLVLCPTRELCLQIAKDIKNYSKYMQNIKTTAVYGGSSITEQMRSLK
DKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILSETPETKQT
FLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNITHEYYVVGYRQKKEALKRLIDAN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQIKFS
TKIEINEKFIPTGEEIIKAQVGGVFEKLFTEHEDLFEFDDKLIPDLSNFTKEELVHQLLQ
FQLKDLALYYKDKHDLVEQKLSNRDDDYSRRDRGRDRDRGRDRDRGGDRGRERGGKPRRK
NENMVRFFFNLGKKDQLKKLDVLDIINKATAGKSKKRAEIGDIEILEKFSFFEVEKSFKG
DLLNNIQSMKFRGKDMRAEEAN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagtccaatttaagtcctgacattcttaaggcaattggcgaaatg
ggctacgaaagcccgacagaaatccaaaaacagactatcccttttattctttcagatatt
cgcgatctaatcgcacttgcgcagactgggacaggcaaaacagcagcattttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaacttttggtgctttgtccgaca
cgagaattatgtcttcagattgctaaagacataaaaaactattctaaatacatgcagaac
atcaaaacgactgcggtgtatggtggaagtagtattacagaacaaatgagatctttaaag
gataagccacagatcatcgtgggaactccgggaagagtcattgaccttatcaacagaaaa
gctcttgatttttcagcgattcactggttagtattagatgaagctgacgaaatgctttcc
atgggtttcaaagacgaattggaaacaattttaagcgaaactcctgaaacaaagcaaact
ttcttgttctcggctacgatgaataaagaagtggagagaatttctaaaaattatcttaca
aagccacatcgtatctctgtagggtctattaacgaagttaaaaagaacattacccacgaa
tattatgtagtagggtaccgtcagaaaaaagaagctttgaagagattaattgatgccaac
ccgaaccagtattccattattttctgtagaacaagaatggaaacccaggaagtggcagat
ttcttaatgcagaacggatatgcagcagatgcgcttcacggggatctttcccaggcgcag
agagatacggtaatgaagaagttcagattgaaaaatatcgatatcttggtagcaactgat
gttgcagcgagaggattggatgttaactctcttacgcacgtaattcactattctttaccg
gatgaccctgaagtattcgttcacagaagcggaagaacaggtagagcaggaaaggacgga
atatcaatggcattgatcaagcctgaagaaagcagaaagctaaagcagatcaagttttca
accaaaattgagatcaacgagaaattcattcctacaggggaagaaatcatcaaagctcag
gttggaggtgtctttgaaaaattatttactgagcacgaagatctgttcgaatttgatgat
aaactgattccggacttaagcaactttaccaaagaagagcttgttcaccagttattacag
ttccaattaaaagatctggcgctatattataaagataagcatgaccttgttgagcagaag
ctaagcaatagagatgatgattattcaagaagagacaggggtcgtgacagagatagagga
agagaccgcgatagaggtggagacagaggaagagagcgcggaggaaaaccaagaagaaag
aatgaaaatatggtaagattcttcttcaatcttggtaaaaaagatcaactgaaaaagctt
gatgttttggatattattaataaagcgacagccggaaaaagcaaaaaaagagcagaaatc
ggtgatattgagattttagaaaaattctccttctttgaagtggaaaaatcatttaaagga
gatcttttgaataatatccaatcaatgaagttcagaggaaaagatatgagagctgaagaa
gctaactaa
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