Chryseobacterium daecheongense: MUU74_02895
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Entry
MUU74_02895 CDS
T08680
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03410
Base excision repair
cdae03430
Mismatch repair
cdae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUU74_02895 (recJ)
03430 Mismatch repair
MUU74_02895 (recJ)
03440 Homologous recombination
MUU74_02895 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdae03400
]
MUU74_02895 (recJ)
DNA repair and recombination proteins [BR:
cdae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MUU74_02895 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MUU74_02895 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUU74_02895 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Paf1
Motif
Other DBs
NCBI-ProteinID:
UOU98907
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Position
582858..584570
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AA seq
570 aa
AA seq
DB search
MSQKWIYKPEPDEEIVDRLSSSLGFGTFESKLLVLRGIDNYQKAREFFKPNLNDIHSPFL
MADMQKAVERIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVEKKYLDYYIPDRNS
EGYGISTEGIDFAKDNGFSLIIALDCGIKAIDMVNYAESLGIDFIICDHHLPGEEIPNAA
AVLDPKRSDCRYPFKELSGCGVGFKLCQGLNTIYKIPEAELFELTDLLAISIAADIVSMT
GENRVLAKMGLKILRKTRNMGLRLLIPEDKLSHFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKHAHQIVDDIMNLNDERRELDMNSTLSALNQIIESQQETKHTTIVYHPEWNK
GVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVSDFDVHEALDLCSEYFLKFGGHHA
AAGLSMEKDKFEAFKEKFERIVSEKIKEHQKEPSVTIDSEIQIDEINREFINFHRKLAPF
GPHNMKPILTLTNQKVSGYVKTMGKDNNHLKFFIKQESTGRNIECVGFKLGQFAEDFRNK
NFDIAFTLEENHWKGNVTHYLNIKDVKFRD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatggatttataagcccgaacctgatgaggaaattgtggacagattaagt
tcgtcacttggttttggaactttcgaatctaaacttctcgttcttagaggaattgacaat
tatcagaaggctcgagagtttttcaaaccaaaccttaacgatatacacagccctttttta
atggccgatatgcagaaagctgttgaacgtattgctactgccattgaaaacggagaaaaa
atattggtatatggagactacgatgtagacggcactaccgccgttgccttaatgtatcta
tacctcagcaaaattgttgagaaaaaatatcttgattattatattcccgacagaaattcg
gaaggatatggaatttctacagaaggaattgattttgccaaagacaatggtttttcttta
atcattgccttagactgcggaattaaggccattgatatggtgaactatgcagaaagcctg
ggtattgattttattatttgtgaccaccaccttccgggggaagaaattcctaatgcagca
gctgtactggatcctaaaagaagtgattgccggtatccctttaaagaattatccggatgt
ggagtgggtttcaagttatgtcagggattaaataccatttataaaattcctgaggccgaa
ttatttgagctgacggatctcctagccatctcgattgctgctgatatcgtatctatgacc
ggagaaaatagggtcttagcaaaaatgggactgaaaatattgaggaagacaagaaatatg
ggattaagactcttgattcctgaagataagctttctcattttgaaatttcgaatattgtt
tttgaaattgcccctaaaattaatgctgcaggaagaatttctcatggaaaagcagctgta
gagttaatggtttctgacaatttgaagcatgctcatcagattgttgatgatattatgaac
ctcaatgatgaaagacgtgagctggatatgaattctacgctttcagctttaaaccagatc
attgagtctcaacaggaaaccaaacatactacgatcgtttatcaccctgaatggaacaaa
ggtgttattggtattgtggcctcaagacttattgagacttattacaaacctactttggtt
tttacggatggtaataacggggaaatggttgcttccgcaagatctgtttctgacttcgat
gttcacgaagcattggatctttgctcagaatacttcctgaaattcggtggccatcacgcc
gcggcaggactttccatggaaaaggataaatttgaagcatttaaagagaaatttgaaaga
atcgtttcggaaaagatcaaagaacatcagaaggaaccatccgtgacgatagattctgaa
atccaaattgatgagatcaacagagagtttattaacttccacaggaaactggctcctttc
ggacctcataacatgaaacctattcttactttaacgaatcagaaagtttcaggatatgta
aaaacgatgggtaaagataacaatcacctgaaatttttcattaaacaagaatctacaggt
agaaatatagaatgtgtaggctttaaacttgggcagtttgctgaagattttaggaataaa
aattttgatattgcctttactttagaagagaatcactggaaaggaaatgtaacacattat
ttaaatataaaggacgtaaagttcagggattga
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