Chryseobacterium daecheongense: MUU74_03880
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Entry
MUU74_03880 CDS
T08680
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUU74_03880 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdae03021
]
MUU74_03880 (rho)
03019 Messenger RNA biogenesis [BR:
cdae03019
]
MUU74_03880 (rho)
Transcription machinery [BR:
cdae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUU74_03880 (rho)
Messenger RNA biogenesis [BR:
cdae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUU74_03880 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
AAA
Rho_N
Mor
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
UOU99099
LinkDB
All DBs
Position
complement(786317..788110)
Genome browser
AA seq
597 aa
AA seq
DB search
MFNLETLRSKSVTELTKILKDLGVKVARTSNENDKIFAILDFQASNPKVAKDYFNATETH
VGTVETPAEKPTKAPVKKAAPKKTAVKPKPEANAPGEMKANTEEKVIEKENTSEQAKPEE
AKAETTTQETPNTGSAKKKRKRVSANTNSTEALQEKTEVPKNTESIESAPAEEKPAHSQS
QARPQKGQNHPHNTGNSNKNPNQNQNQNQNRQPERQEETEHKKEFNFDGMVSIEGVLEIL
PDNYGFLRSSDFSYISSPDDVYVSTAQIRNFGLKTGDTVKGIVRLPKEGEKYFSLLKPTE
VNGRDLAFIKDRVAFEYLTPLFPEEKFNLAGKGSTVSTRVVDLFAPIGKGQRAMIVAQPK
TGKTMLLKDIANSIAANHPEVYMMVLLIDERPEEVTDMERSVNAEVIASTFDEAAEKHVK
VANLVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKVLSGGVDANALHKPKRFF
GAARKIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANRRIYPAIDLV
ASSTRRDDLLLDEVTSQRMWILRKYLSEMNPVEAMEFVDKNIKGTLNNEEFLMSMNK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacctagaaacgttaaggtcaaaatccgtaacggaactgactaaaatcttgaaa
gatttgggcgttaaagttgcaagaaccagcaatgagaatgataaaatctttgcaattctt
gattttcaggcttctaaccccaaagtcgcaaaagattatttcaatgctacagaaacccat
gtgggaactgtagaaacgccggcggaaaaaccaacgaaagcacccgttaaaaaggctgct
ccaaaaaaaacggcagtcaaaccaaaacctgaagcgaatgctccgggagaaatgaaagcc
aatacagaagaaaaagtgatagaaaaagagaatacttctgaacaggcaaagccggaagaa
gcaaaagctgaaacaacaacacaagaaactccaaatacgggatcagctaagaaaaaaagg
aaaagggtttcagccaatacaaacagtaccgaagctcttcaggaaaaaacagaagtccct
aaaaacacagaatctattgaatctgctccagcagaagaaaagcctgctcattctcaatct
caggctagaccgcaaaaaggacaaaatcatccgcataacacggggaattccaataaaaat
cctaaccaaaaccaaaatcaaaaccagaacagacaacctgaaagacaggaagaaactgag
cacaaaaaagagttcaatttcgatggaatggtaagtattgaaggcgttttggaaatatta
ccggataattacggattcttacgttcatcggatttcagttatatttcgtctcctgatgat
gtgtatgtttccacagcgcaaatcagaaactttggactgaaaacgggagatactgtaaaa
ggaatcgtgagattacccaaagaaggtgaaaaatatttttcattattaaaaccgacggag
gttaacggacgtgatttggcatttattaaagaccgtgttgcgtttgaatatttaacgccg
cttttcccggaagagaaatttaatcttgcaggaaaagggtccaccgtttctaccagagtg
gtggatctttttgcacctatcggaaaagggcagagagcgatgatcgttgctcagcctaaa
accggtaaaactatgttgctgaaagatattgctaattctattgctgccaatcacccggaa
gtgtatatgatggtccttctcattgacgaacgtcctgaagaagttaccgatatggaaaga
agtgtaaatgcagaagtcattgcttctacatttgatgaggcggcagagaaacatgtgaaa
gtagccaacctggtgttagcaaaagcacaaagaatggtggaatgtggtcacgatgtggtc
attttattagattccattacaagattggcaagagcttataatacagtaacccctgcttct
ggtaaagttctttccggaggggtggatgccaatgctcttcacaagccgaaaagattcttt
ggtgcagcgagaaagattgaagggggaggttcattaaccattattgcaacagctcttatt
gatacaggttctaaaatggacgaagtgatctttgaagaattcaaaggaactggtaatatg
gaacttcaattagacagaaaaatcgctaacagaagaatttatcctgcgattgacctggtt
gcatccagcacccgtagagatgatttgcttcttgatgaggtaacttcccaaagaatgtgg
atcttaagaaagtatctttccgaaatgaatcctgtggaggcaatggaatttgtagataaa
aacatcaaaggaactttaaataatgaagaattcctgatgtctatgaataaataa
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