Chryseobacterium daecheongense: MUU74_08635
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Entry
MUU74_08635 CDS
T08680
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUU74_08635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdae03019
]
MUU74_08635
03400 DNA repair and recombination proteins [BR:
cdae03400
]
MUU74_08635
Enzymes [BR:
cdae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUU74_08635
Messenger RNA biogenesis [BR:
cdae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUU74_08635
DNA repair and recombination proteins [BR:
cdae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUU74_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UOV00008
LinkDB
All DBs
Position
complement(1794500..1796401)
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AA seq
633 aa
AA seq
DB search
MISSQEFQQLKYKTLKHFWGYDSFRDSQEEIIDSAITEKDTLVLLPTGAGKSLCYQLPAL
LKEGVCLVISPLLALMKDQVNQLKHRGIEAEYLSSELEDFDAEIIFNRCKEGLTKLLYIS
PERLNNTQFLQNIEDIQLSFIAVDEAHCISEWGQDFRPSYQNIKEFRKNNPGIPCLALTA
TATPKVLEEIKLKLELKNAKVFQKSFKRKNIKIFTDEVSDKFQRVLDILKYNTSSGIVYV
RTRKEAELLTGFLQKNKLKNVDFFHAGLTTKEKNIRQNTWNNSDQHVLISTNAFGMGIDK
DNVRFIIHFSPSSSLENYYQEIGRAGRDGKDSYAFLLWNKQEIVNFDQILKNQTPSKSEF
QRIITYLYSIFQIAEYEMPEKVFQLNMTGIQNFTKLSTAKIKNVLNFLHNQEIIYFNDNK
SLSSVELLMQADEIDQIPHKDAYFIELLLRTVSGITSHKVMFSEQQVSNKIGVGIPLIKE
RLKELHQKNYLEYVDGALSSVKFLKPRDERAINGAYWHLFEHIQKNKIQKWEEMKFYVEN
KDYCKMKLILSYFGEKNAKNCDQCSVCEQNKQSIFGQNISVQIVDLLAKKPATIEELSVQ
LSYHPKENILENLIFLLDSGKVKMLNFRTYMLA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgtctcaagaattccagcagctcaaatataaaacccttaagcatttttggggt
tatgacagtttcagagattctcaagaagaaattatcgattctgctatcactgaaaaagac
actttggtattattacccacaggagccggaaaatctttatgctatcaactccctgcctta
ttaaaagaaggcgtttgtcttgttatttctcctttattggccttgatgaaagatcaggtg
aatcaattaaagcaccgtggtattgaagcagaatatttatcatcagaactggaagatttt
gatgcagaaataatattcaacagatgtaaagaaggcctcacaaaattactttatatatct
ccggaaagattgaataacactcaatttcttcaaaatatcgaagatatccagttatctttc
atcgctgtagatgaggctcattgtatttcggaatggggacaggacttcagaccaagctat
cagaatataaaagaattcagaaagaataatccgggaattccttgcctggctttaacagcc
accgctactccaaaggtccttgaagaaatcaaactgaaactggaacttaaaaatgctaaa
gttttccagaaaagctttaaaagaaaaaacattaaaattttcaccgatgaagtttctgac
aaattccaaagagtactggatattctaaaatacaatacaagttccggtattgtctatgta
agaacgagaaaagaagctgaattgcttaccggctttttacagaaaaacaagttgaaaaat
gtagatttcttccatgcagggctcaccacaaaggaaaagaatatcagacaaaatacctgg
aataatagtgatcaacacgtattgatttccaccaatgcttttgggatgggaatcgataag
gataatgtacgttttataatccacttctctccttcttcttcattggaaaactattatcag
gaaattgggagagccggaagagatggaaaagacagctatgcttttctgctttggaataag
caggaaattgtaaactttgatcagattttaaaaaatcaaactccaagcaaatcggaattt
caaagaatcattacctacctctactctattttccagattgctgaatatgaaatgcctgaa
aaagtttttcagcttaatatgacgggaattcaaaacttcactaagctatcaaccgctaaa
ataaagaatgtcttgaattttcttcataatcaggagatcatttattttaacgacaataaa
agcttatcatcggttgaactgctgatgcaggctgatgaaatagatcagatcccccataaa
gatgcttattttatagaacttttacttcgtacggtttcggggattacttctcataaggtg
atgttcagcgagcagcaagtaagcaacaagattggagttggaattccattaatcaaagaa
cgccttaaagaactacatcagaaaaattatctggaatatgtggatggcgcattatcgagt
gtaaaattcttaaagccaagagatgaaagagccatcaatggtgcttactggcatctcttt
gagcatattcagaaaaataaaatccagaaatgggaggaaatgaaattttatgtagaaaat
aaggattactgcaagatgaaacttatcttgtcttattttggagagaaaaatgcaaaaaat
tgtgatcaatgttctgtttgtgagcaaaataagcaatctatttttggacaaaatatttct
gttcagattgttgatttgttggctaagaaacctgccaccattgaagaactttctgtgcag
ctaagttatcatcctaaggaaaacattttggaaaaccttatttttcttttagattccgga
aaggtgaagatgctgaattttcgaacctatatgttagcttaa
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