Chryseobacterium daecheongense: MUU74_12485
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Entry
MUU74_12485 CDS
T08680
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUU74_12485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdae03019
]
MUU74_12485
03400 DNA repair and recombination proteins [BR:
cdae03400
]
MUU74_12485
Enzymes [BR:
cdae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUU74_12485
Messenger RNA biogenesis [BR:
cdae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUU74_12485
DNA repair and recombination proteins [BR:
cdae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUU74_12485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOU97305
LinkDB
All DBs
Position
2605046..2606707
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AA seq
553 aa
AA seq
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MSAKKADLSGELKKYFGFSTFKGQQEQIIESLLDGKDVFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKDVKISFFAIDEAHCISEWGHDFRPEYRNLKLIIDKIADVPVIALTA
TATPKVQDDIQKTLGMANALVYKESFNRPNLYYEVRPKINVDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGESFDPVKGDGATMCDNASDPPKLKDATDDLKKV
LELINDTGEKFRAKDLISVIAGKETAVTKSYKLEQNSYFGFGKDEKDNHWKTILRQATVQ
NFLQKDIETYGVLKIAEKGKLVLEGKLEHSFLIAEDREFDLTQAKAESEQIQMQAGGGLD
QNLFNQLKELRKK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccgatttatccggcgaattgaaaaaatattttgggttttctacg
tttaagggtcagcaagaacaaatcatagaaagcctgttggatggaaaagatgtgtttgtt
ttgatgcctacgggagggggtaaatcattatgctatcagcttccggctcttatttctgaa
ggaacagcaatagtagtttcgcccttaatagccttaatgaaaaatcaggtagatgccgta
aacggactttcatctgacgacggagttgcccacgttttaaactcatcattgaataaaaca
caaaccaagcaggtttttgacgacattaaaagcggaaaaacaaaactcttgtatgtagct
cccgaatcattgatcaaagatgattatcttgattttctgaaagatgtgaaaatctctttc
tttgctatagacgaagcacactgtatttcagaatggggacacgatttcagaccggaatac
aggaacctgaaactcattatcgataaaatagccgatgttccggtcattgcattaacggct
acggcaactcctaaagttcaggatgatattcaaaagactttagggatggccaatgcactg
gtctataaagaaagctttaaccgcccgaacctgtattacgaagtacgcccgaaaatcaat
gtagataaggaaatcgttaagtttatcaatcagcataaaggaaaatcgggaatcgtatac
tgcttaagccgcagaaaagtggaagaatttgcccagcttttgcaggtaaacggaattaat
gcgcttccttatcatgccggattagaccaaaaggtaagagtggcgaatcaggataaattc
ctgatggaagaagtggacgtgattgtagctaccattgcattcgggatgggaattgacaaa
ccggatgtacgttttgtgattcattatgacttccctaaatcgctggaaagctattatcag
gaaaccggacgtgccggaagagatggaggagaaggacactgtttggcattctatgatcct
aaagatattgaaaaattagaaaaattcctggctcaaaagcctgtttccgaaagagaaatc
ggattacagcttctcaatgaagttgtaggttatgccgaaacctcaatgagccgaagacag
tatatcctgtattatttcggggaaagttttgatcccgtaaaaggagacggagccacaatg
tgcgataacgcatctgatccgcccaaattgaaagatgctactgatgatcttaagaaggtg
ttggagctaattaatgatacaggagaaaaattcagagctaaagacctgatttctgttatt
gcaggaaaagaaacagcggttacaaaatcatataaactggaacagaattcttatttcggt
tttggaaaagatgaaaaggataaccactggaaaaccattttaagacaggcaactgttcag
aatttcttacaaaaggatattgaaacatacggtgttttaaagatcgcagaaaaaggaaaa
ctggttttagaaggaaaattggaacattcctttttaattgcggaagacagagaatttgat
cttacccaggctaaagctgaaagtgagcagattcaaatgcaggcgggaggcggtttggac
caaaacctgttcaatcaattaaaagaattaagaaaaaagtag
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