Chryseobacterium daecheongense: MUU74_16580
Help
Entry
MUU74_16580 CDS
T08680
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdae
Chryseobacterium daecheongense
Pathway
cdae03030
DNA replication
cdae03430
Mismatch repair
cdae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUU74_16580 (dnaE)
03430 Mismatch repair
MUU74_16580 (dnaE)
03440 Homologous recombination
MUU74_16580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdae03032
]
MUU74_16580 (dnaE)
03400 DNA repair and recombination proteins [BR:
cdae03400
]
MUU74_16580 (dnaE)
Enzymes [BR:
cdae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUU74_16580 (dnaE)
DNA replication proteins [BR:
cdae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUU74_16580 (dnaE)
DNA repair and recombination proteins [BR:
cdae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUU74_16580 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UOU98098
LinkDB
All DBs
Position
complement(3485138..3489805)
Genome browser
AA seq
1555 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLSDSENWPRMVQIAWQLHDDEGNLIENQDYIIKPEGYDIPF
NAARIHGITTKIANEEGRDLQEVLEEFSKVLERVRVVSGHNVEFDYNIVGAEFFRKNLED
NLQEKPKADTMILGTDFCQLGGGRGGKFKPPKLEELYEKLYGSKFDEAHNAAADVNATAQ
VFFEMMRVGIIPAEVLKISEDQLRYFKTLYPDPIKPFGIVIRRQVADFHNKKKQTDFGSI
DEIDLGKYFNFDNHSVFSTLMATSSISDLIKRASDDNFPAVGMVDLGNMMGAFKFVSAVE
SANSDRAKKHKDYLAKKQEAEENGEAFNEEEPISEPLIPVVGCEFYISDRYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRISRELIAEYKDGLIALTSGIHG
DIPDAILNTGEQKGEELFKWWKETFEDDFYVQIQNHKLPEEEHLNEVLLYLADKYNVKIL
AQNETFYTDKGDSNIQDIVSCIKDGEKLSTPVGKGFGKRRGLATGEYYIKNSDEIKEAFL
AYPDAFEAYEEFLAKFSPYTLKRDVLLPKFDIPEEFVHPEDEVDGGKRGEMAYLTHLTYE
GAKRRYVDTGITDEIKERLDFELDVIANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDRIIKWVIDKYGQSQ
VAQIITYSVLGGKSAIKDAGRVLDVPIPETNNIAKLVPSTPGMNIAKALSKYDKLKPEEQ
MLVDEMRMVLNNPEDPRFDVLESAKKMEGCIRNTGIHACGVIITPEEVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKERHGVDIDPDTIPLDDQKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLDETRLEKIWNDWKAFAEYAFNKSHSTCYALVAYHTAFLKANYPAEYMA
SVMSNNINNTAQITMFMEDCKSMGVDVLGPDVNESQYKFSVNEKGQIRFGLGAIKGIGEG
PSEAITKERENGRFKDIYDFFERIPSSQVNKRVAESLVIAGAFDELDKYHRGQYFDIDVA
GRTNLERLLRYGQSFQESKNEVENSLFADFAEEIQIEQPKLAPCPEWPNMHKLNKEKEII
GFYLSAHPLDEFKYQFQFMQGQLSKKSVLEKEEGEKIVVDEAPILEQDTVDEVVDIVEIV
SDELLTGEEEIIEETTKKAEPKGNFGFLNLDEVDAYKEQAFSNKPPELFEEKKKDWKQIQ
KEKENGGGGKEFTVAGLITEYRVQDGFKSGEKVAFLTLEDYTGSYSFRLGDRDYMRLKEK
LEVQRFVILKIKFAQVKDGRVFVNVNEVIELKEAFERFAKSISLVMDVMDFRKEDLEFFR
TVLEKNKGEQKLKFYLKNIEDDSHIELQSMKYSVDLNGDLIKEIQLLNKYEFYLN
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatacagaaaccacagggctaccaaaaaatttcaacgctcctctt
tcagattcggaaaactggccaaggatggttcagattgcatggcaattacatgatgatgag
ggaaatttgatagaaaatcaggattatatcattaagcctgaagggtatgatattcccttt
aatgctgccagaattcacgggataactacaaagattgccaatgaagaaggtcgggatctg
caagaagttttggaagaattttctaaagttctggaaagggtgcgggttgtatccggacac
aatgttgagtttgattataatatagtaggtgctgagttttttaggaaaaacttagaagat
aatcttcaggaaaaaccaaaagcagacaccatgatcttaggaacggatttttgtcagctt
ggaggcggaagaggtggaaaattcaagccgccaaagcttgaagaattatatgaaaaacta
tatgggagtaaatttgatgaagcacacaatgctgccgccgacgtaaatgcaacggcgcag
gttttcttcgaaatgatgagggtggggattattcctgctgaagtgctgaagatttccgaa
gaccagctaagatatttcaaaacgctttatccggacccgataaaacctttcggaatagtg
atccgaagacaggttgcggactttcataacaagaaaaaacagaccgatttcggaagtatt
gatgaaattgatcttggaaaatatttcaatttcgacaaccacagtgttttttcaacattg
atggcaacgtcgagtatttctgatcttatcaaaagagcttcggatgataatttccctgct
gtaggaatggtggatctggggaatatgatgggagcctttaaatttgtttctgccgtagaa
tctgccaattcagacagagctaaaaagcataaagattatcttgccaaaaagcaggaagca
gaagagaatggtgaagctttcaatgaggaagaaccgatttcagaacctttaattccagtt
gtaggttgtgaattctatatctcggatcgttacgaacaaaagcaatttaccaaagatgat
ccggatagaagaacacaggttgttcttctggcaaaagacttcaatggatataaaaacctg
gcgaagctttcgagtatcgggtttttaaaggggttttacttcggagttccgaggattagt
cgtgaacttattgcagaatataaagacggtctgatagccttaacttccgggattcatgga
gatattcctgatgcgatcttaaatacaggggaacaaaaaggggaagaacttttcaaatgg
tggaaagaaacttttgaagatgatttttatgttcagatccaaaatcacaaactaccggaa
gaagaacacttaaatgaggttttattatatctggcggataaatacaatgtaaagatcctg
gctcagaatgaaactttttataccgataaaggcgattccaatatccaggatattgtaagc
tgtatcaaagacggtgaaaaactgtcaactcctgtaggaaaaggttttgggaagcgaaga
ggattggcaaccggtgaatactatatcaaaaacagcgatgaaattaaagaagcatttctt
gcctatccggatgcctttgaagcatatgaagaatttttggctaaattcagtccatataca
ttaaaaagagatgtacttcttcctaaatttgatattcctgaggagtttgttcatcctgaa
gatgaggttgacggaggaaaacgaggtgagatggcttatcttactcatttaacttacgag
ggggccaaaagaagatatgttgatacagggataaccgatgaaattaaagaacgtcttgat
ttcgaattggatgttattgccaatacagggtatcccggatattttcttattgttcaggat
ttctgtaatgaagctagaaaaatgggagtgtgggtgggtcccggacgtggttccgcagca
ggttctgctgtagcctattgcattgggattactaatgtggaccctattaaatatgacctc
ctttttgagagattcctgaatccggaaaggatttcaatgcccgatattgatattgacttt
gatgatgaaggaagggatagaattatcaaatgggtaattgataaatatggacagagtcag
gttgctcagatcattacgtattccgttcttggagggaaatctgctattaaagatgcaggg
agggtactggatgttccgattcccgaaactaataatattgccaaattggttccttcaaca
ccggggatgaatattgcaaaggcattgtcgaaatatgacaaattaaagcctgaagaacag
atgcttgtcgatgagatgagaatggttctcaataatcctgaagacccacgttttgatgtg
ttggagagtgctaaaaaaatggaaggatgtatccggaatacgggtattcatgcttgtgga
gtaattattacgccggaagaggtaagtaatcttgttccggtaactattgctgcaaaagat
gcggacattcttgtttcgcagtttgataactccgttgcagaaagtgccgggttattgaaa
atggactttctgggtcttcgtacattaaccattatcaaagatgccttgaagcttgttaaa
gaaagacatggtgttgatattgatcctgatacgattccacttgatgatcaaaagacttat
caattatttaaagaaggaagaacagtggggattttccagtatgaaagtccgggaatgcag
aaatatatgagagagcttaagccaacggtttttgctgaccttattgcgatgaatgcgctt
tatcgtccgggtcctattaaatatatcccgaatttcattaacaggaaacacggtattgaa
gagattgtttatgatttacctgaaactgaggaatatttaaaggaaacctatgggattacc
gtttaccaggagcaggtaatgcttttatctcagaaattggccaattttaccaaaggtgaa
gccgatactctgagaaaagcaatgggtaaaaagcagatcgatgttctgaataaaatgtac
cctaaattcattgaaggtgggcgtaaaaataatcttgatgaaacccgtctggaaaaaatc
tggaacgactggaaagcgtttgcggaatatgcgtttaacaaatcccactcaacgtgttat
gcgctggtggcttatcacaccgcttttttaaaagccaattatcctgcagaatatatggcg
agtgtaatgagtaataacatcaacaatacagcgcagatcactatgttcatggaagattgt
aagagtatgggagtggatgttttagggccggatgtgaatgaatctcaatataagttctcg
gtaaacgaaaaaggacagatccgttttggtttgggagcgatcaaagggattggggaaggg
ccgagtgaagctatcactaaagaaagagaaaacggaagatttaaagatatctatgacttc
tttgaaagaattccttcatcacaggttaataaaagggtagcggagagtttggtgattgcc
ggagcctttgatgaattggacaaataccacagagggcagtattttgatatcgatgtggca
ggaagaaccaatttggaaaggcttttaagatatggtcaaagctttcaggaaagtaaaaat
gaggtagaaaattctctttttgctgactttgctgaagaaatccagattgaacagcctaaa
ttggctccttgtcctgagtggccgaatatgcataagcttaataaagaaaaagaaattatc
ggattctatctttccgcacatccattggatgagtttaaatatcagttccagtttatgcaa
ggacagctttccaagaaatccgtattggaaaaagaagaaggtgaaaaaattgtggtggac
gaagctcctattttagaacaagatacggtggatgaggttgttgatattgtggagatagtt
tctgatgaattgctgactggagaagaagagattattgaagaaacaacaaaaaaggcagaa
cctaaaggaaatttcggatttctgaatcttgatgaagtagatgcttataaagaacaggca
tttagcaataaaccaccggaattattcgaggaaaagaaaaaagactggaaacagatccaa
aaagagaaagaaaacggtggcgggggaaaagaatttactgtagccggattgattacagaa
tacagggtgcaggatggttttaaaagtggtgaaaaggttgcttttcttacattggaagat
tatacgggttcttattctttcaggttgggagacagagattatatgcgtttaaaagaaaag
cttgaagtacagcgttttgtgatcttaaaaataaaatttgcacaagtaaaagacggccgt
gtattcgtgaacgttaatgaagttattgaacttaaagaggcatttgaaagatttgctaaa
agtatatctctggttatggatgtgatggatttcaggaaagaagatctggagtttttcaga
actgttctggaaaaaaataaaggtgaacagaaattgaaattctatcttaaaaatattgag
gatgattcccatatagagcttcagtccatgaaatattctgttgatctgaacggtgacctc
attaaggaaattcaactacttaataaatatgagttttatttaaattaa
DBGET
integrated database retrieval system
