Caldicellulosiruptor danielii: SOJ16_000140
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Entry
SOJ16_000140 CDS
T09647
Name
(GenBank) DEAD/DEAH box helicase
Organism
cdan
Caldicellulosiruptor danielii
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DUF61
DUF2624
HDA2-3
AAA_34
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WPX08973
LinkDB
All DBs
Position
complement(166926..170279)
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AA seq
1117 aa
AA seq
DB search
MSVELDYQTIVQFLAEPELAYLAKNRKAFEKGIDLSRKIKKEDIEYDQEENAIFAKVAEG
KNEFWVFISFDLPSYIPQDFFGNIEIRSIDIIAACSCILENITFEPEEEIDIEDFVQSEN
FCRHIIAVLKSFADGKFTVSSLKSMQEALTQMLEQKLNETTEKEKLKNSRLYQIISTNFE
ERYIQFLLDKPLKEVPNIFLEKYLGSSLNDIITLKFKIRTSGIKRDYVVSDIPEFLKAYE
QKQPFQFGKNFVYNPTCHFFGKKDRKLLDVLLKYQNFLNLVEEKNTLYLPAKIANEIIEI
LDNEEIFISFGYFVANYYDAQKIKVDLCSKVKPKIAFKFEDNQVRLYSDLIDIENGKLVY
SDGSFFVSDGTLFKLTPEQRIFSSIIKKIAEAKRIVDIFKTIYMKFIPFNLEDFCEFMNK
YYLFLNQHFELEIDPALKKFILEDHIIKPKLYLEIENERFVAKIRGMNEMFDTISKTKRV
PLFDYLSLFQLQSILLAHGFYEIQSDEEFEYECLDPDMFMEFLAEGISQVQKITDVYYSE
DFKKLKIKNDIKITPCFKHSGYSIDFWLESDELDSTELKNILDAIKKKKKYYKLKDGSIL
ILESPKIKELSSFIDSASDIGQVIKEKAKLLLPEAVAITKLLDESGIQVKGTESIKSIIE
KIENIREIDIQIPIELQGVLRDYQKIGIKWLSSLYENGLGGILADDMGLGKTVQVLGFIL
ANKQKINKPVLIIVPTSLIYNWKQEIDKFAPSLKALIIDSTPAKRKKAIEKIPEYDIVIT
SYALFRKDVELYRDIYFSVCILDEAQYIKNPSSQIKLAVKEICADSKFALTGTPIENNLM
ELWSIFDFILPGYLGSAEKFIDRFLTPIYNGNNIALEKLKKLIKPFVLRRVKQDVLNELP
ELIETTIQVAMSPEQEKIYKQFLVSAKEEIEKEIDAVGFEKSQIKILSLLTRLRQICCHP
KLVFEDYKGGSGKLEALKELFQDSIESGHRVIVYSQWTSMLSIIQKMLDKEKIEYFYLDG
ATKAEDRVEMVNRFNSGERKVFLLSLKAGGFGLNITGADVVIHFDAWWNPAVESQATARA
HRLGQKNVVQSFKIIAKNSIEEKILHLQQKRKTCSIA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggaacttgattatcaaacaatagtccagtttctcgcagagccagaacttgcg
tacttagcaaaaaacagaaaagcttttgaaaagggaattgacctttctcgaaaaatcaaa
aaagaagatattgagtatgaccaagaagaaaatgcaatatttgcaaaggtagcagagggc
aagaacgaattctgggtttttatcagttttgacttgccttcatatatacctcaagacttt
tttggaaatattgaaatccgaagcatagatataattgctgcatgttcatgcatcttagaa
aacattacctttgaaccagaagaagaaatagatattgaagattttgtccaatcagaaaat
ttttgcaggcatataattgctgtgttaaaaagttttgctgatggcaagtttactgtgagt
agcctcaagagtatgcaagaagctttgacacagatgttagaacaaaagctaaatgaaact
actgagaaggaaaaattaaaaaactctcgcctttaccagattatatcaaccaattttgag
gaaagatacatacaatttttgcttgataagccattaaaagaagttcctaatatattttta
gaaaaatatcttggttcttctttgaatgatataataactctgaaattcaaaataagaact
tcaggtattaaaagagactatgtggtttcagatataccagaatttctgaaagcatacgaa
caaaaacaaccttttcagtttggtaagaatttcgtgtataatccaacttgtcattttttt
ggtaaaaaagatagaaaacttttggatgtgcttttgaaatatcagaattttttaaactta
gtagaggaaaaaaataccttataccttcctgcaaaaattgcaaatgaaataattgaaatt
cttgacaatgaagaaatttttatatcttttggttattttgtagcaaattactacgatgct
caaaaaataaaggttgatctttgctccaaagtaaaacctaagattgcttttaaatttgaa
gacaatcaggtcaggctctacagtgatttaatagacattgaaaacggaaaattagtatac
agtgatgggagcttttttgtatcagacggtactctttttaaactgacaccagaacaaaga
atattttcttcaattatcaaaaagatagcagaggcaaagagaatagttgatatctttaaa
actatatacatgaaatttattccttttaatctcgaagatttttgtgaatttatgaacaaa
tactatctatttttaaaccaacactttgaattagaaatagacccggcactgaaaaaattt
atattggaagaccatattatcaaacctaaattatatttagagattgaaaatgaaaggttt
gtggcaaaaatcaggggaatgaatgaaatgtttgatactatttcaaaaacaaaaagggtt
ccattgtttgattatctcagtttatttcagctgcaaagtattttactggcccatgggttt
tatgaaatacaatctgacgaagaatttgaatatgaatgtcttgacccggatatgttcatg
gaatttttagcagaaggaatttcgcaagttcaaaaaataactgatgtttattattctgaa
gattttaaaaagctgaagataaaaaatgatataaaaattactccttgtttcaaacattcc
ggatactcgattgacttctggcttgaaagcgatgagcttgacagcacagaactgaaaaat
atcctcgatgcaatcaagaaaaagaaaaaatattacaaactcaaagatggttctattttg
attttagaaagtccaaagataaaagagctatcctcgtttatagactctgcatctgacata
gggcaggttataaaagaaaaagctaaacttttattaccagaagcagttgctataacaaag
cttttggacgaaagtggaattcaagtaaaaggaacagaaagtattaaaagtattatcgaa
aagatagaaaacataagagaaattgatatccaaatcccgattgagcttcaaggtgtgtta
agagattatcaaaagattggaataaagtggttatcttctctatatgaaaacggtcttggt
gggattttggctgacgatatggggcttggcaaaacagttcaggttcttggatttattctt
gctaacaagcaaaaaataaataaacctgtgctaattattgtgccaacatcacttatttat
aactggaaacaggagattgataaatttgctccaagcttgaaagctttaatcattgactca
acacctgcaaagcgcaaaaaagccatagaaaagataccagagtatgatattgtaattaca
tcatatgctcttttcagaaaagatgtagaactttacagggatatttattttagtgtatgt
atcctcgatgaagcacagtacattaaaaatccttcatctcagataaagctggcggtaaaa
gaaatctgtgcagattctaaatttgcactgaccggtacaccaatagaaaataatcttatg
gagctgtggtcaatctttgactttatacttcccggatatttgggaagtgcagagaaattt
attgaccgttttttgacgccaatctataatgggaataatattgctctggaaaaattgaaa
aagctgataaaaccgtttgttttaagaagagtaaaacaagatgtgttaaatgaacttccg
gagctaatagaaacaaccatacaggttgcaatgagccccgaacaggaaaaaatttacaag
cagtttttagtctcagctaaagaggaaattgaaaaagaaatagacgctgtgggatttgaa
aaaagccaaataaaaatactttcgttattaacaagactgagacagatttgctgccatccg
aagcttgtctttgaagattataaaggtggctcgggcaagctggaagcactgaaagagctt
ttccaagacagtatagaaagtgggcacagggtgattgtatattcacagtggacatcaatg
ctatctattatccagaagatgcttgataaagaaaaaatcgaatacttttatttagatggt
gcaacaaaagccgaagacagagttgagatggtaaacaggtttaatagcggtgagagaaaa
gtctttcttctttcactaaaggctggcggatttggacttaacataactggcgcagacgtt
gttattcattttgatgcatggtggaatcctgctgttgaaagtcaggcaacagcaagagca
cacaggttgggtcagaaaaacgttgttcagtcgtttaagattatagccaaaaattcaata
gaggaaaaaatacttcatctgcagcaaaaaagaaagacctgctcgatagcttaa
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