Anaerocellum danielii: SOJ16_000703
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Entry
SOJ16_000703 CDS
T09647
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cdan
Anaerocellum danielii
Pathway
cdan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SOJ16_000703 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdan03021
]
SOJ16_000703 (rpoD)
Transcription machinery [BR:
cdan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOJ16_000703 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WPX09491
UniProt:
A0ABZ0U199
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Position
776704..777957
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AA seq
417 aa
AA seq
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MTEQNMENNEVKNLNEQNINKETGIEQQQEVEKQLVASQRNENPEKQPAKKSTESKSEGK
KMSEEKKTLIREKVRELISLGQNKGFLTYSEIQEILDKVELDASQVENIYDTLESMGIDV
VDDRVSEEELLKDDLENLPEGIAIDDPVRMYLKEIGKIPLLTPEEEIELAKRIEQGDEEA
KKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLLKAVEKFDYRKGYKFSTYATWWI
RQAITRAIADQARTIRIPVHMVETINKLVRVSRQLLQEKGREPTPEEIAKEMNMPVEKVR
EILKIAQEPVSLETPIGEEEDSHLGDFIPDDDALAPSEAAAYSMLKEQLLEVLDSLNDRE
KKVLKLRFGLEDGRARTLEEVGREFNVTRERIRQIEAKALRKLRHPSRSKKLKDFLE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcagaacatggaaaacaatgaggtgaaaaacctcaatgaacaaaatataaat
aaagagactggaatcgaacagcagcaagaggttgaaaaacaattggttgcatcacagaga
aacgaaaacccagaaaagcagcctgctaaaaagagcacagaaagtaaatcagaaggtaaa
aaaatgagtgaagaaaagaagacacttataagagaaaaggtcagagaacttatatctctg
ggtcagaacaaaggttttctgacatattctgaaatacaagaaattcttgacaaggtagag
cttgacgcaagccaggtagaaaatatatatgataccttggagagcatgggaattgatgtt
gttgacgacagagtgtcagaggaggagctcttaaaagacgatttggaaaatctacctgaa
ggtattgctatagatgatcctgtcagaatgtatttgaaggaaattggcaagattccactt
ttgacacctgaagaggagattgagcttgcaaagaggattgaacagggggatgaagaggct
aaaaagagacttgctgaagcaaacttgaggcttgttgtgagcattgcaaaaaggtatgtg
ggaagaggaatgctttttttggaccttatccaggaaggtaatcttggtcttttgaaggct
gttgaaaagtttgactacagaaaaggatataaattttccacatatgcaacatggtggatt
cgccaagcaatcacaagggctattgctgaccaagcaagaactatcagaattcctgtgcac
atggttgagacaataaataagcttgtgagagtatcacgtcagcttctacaagaaaaggga
agagagccaacacctgaagagatagcaaaagagatgaacatgccagttgaaaaggtgcgc
gagatactaaagattgcacaagaaccagtgtcacttgagactccaattggagaagaagaa
gacagccacttgggtgactttattccagatgacgatgctcttgcaccatctgaagcagct
gcatattcaatgctaaaagagcagcttttagaggttttggattcactcaacgatcgtgaa
aaaaaggtcttaaaactcagatttggacttgaagatggcagggcaaggaccttagaagag
gttggcagagaattcaatgtgacaagagaaagaattcgtcagattgaagcaaaggcactg
agaaagttaagacatccaagcaggagtaaaaagcttaaggattttctggaataa
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