Anaerocellum danielii: SOJ16_001006
Help
Entry
SOJ16_001006 CDS
T09647
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdan
Anaerocellum danielii
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdan03016
]
SOJ16_001006 (truB)
Enzymes [BR:
cdan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOJ16_001006 (truB)
Transfer RNA biogenesis [BR:
cdan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOJ16_001006 (truB)
Prokaryotic type
SOJ16_001006 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UPF0150
SoFic-like_C
MCM4_WHD
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WPX09763
UniProt:
A0ABZ0U594
LinkDB
All DBs
Position
1073917..1074789
Genome browser
AA seq
290 aa
AA seq
DB search
MNGVLLVDKPVGITSHDVVEFVKKVFNVKAGHAGTLDPFATGLLVILLGEATKLSSFFTS
QEKTYIATMQFGMRTDTLDITGKIKEKNNVIVEKKEIEECFKNLEGEIELDVPIYSAKKL
KGKKLYEYARKGINIEIPKVKSIIYNIEIINYSYPYLEFKVRCSHGTYIRSLAEKIAESL
STIGLLSELKRTKSGFFDLKDAVLLSDIRAESIIPVCRLFKNEIKVDRKTYKKILNGNLL
VNQDIEDIIDIDTTFADFFKIWVDKAVFIYKRERDVFKYILKVETTDECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgtcgacaagccagtaggaataacctcacatgatgttgttgaa
tttgttaaaaaagtgttcaatgtgaaagctgggcatgcaggaacgctcgacccatttgca
acagggcttttggtcattttgctgggggaggctacaaagctttcttctttctttacaagt
caagaaaaaacatatatagcaacaatgcagtttggtatgaggaccgatacgctggatata
actggtaaaatcaaagaaaagaataatgtaatagttgaaaaaaaagagatagaagaatgt
tttaaaaatttagaaggagaaattgagcttgatgttccaatttattctgcaaagaagctt
aagggtaaaaaactctatgagtatgcacgaaaaggaataaatattgaaattccaaaggtt
aagagtatcatatataatatagagataattaactattcatatccgtatcttgaatttaaa
gttcggtgtagccatggaacgtatataagaagtttggctgaaaagattgcagaaagtctt
tctactataggtctactttctgagctaaaaaggacaaaaagcggtttttttgatttaaaa
gatgcagtgttgcttagtgatattagggcagaaagtataattcctgtgtgcaggctattt
aaaaatgagataaaagtagatagaaaaacatataaaaagattttaaatgggaatctactt
gtaaaccaggacatagaagatattatagatattgacactacttttgcagactttttcaaa
atctgggttgataaggctgtctttatctacaaaagagaaagggatgtattcaaatatatt
ttaaaggtggaaactacagatgaatgtttatga
DBGET
integrated database retrieval system
