Anaerocellum danielii: SOJ16_001009
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Entry
SOJ16_001009 CDS
T09647
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cdan
Anaerocellum danielii
Pathway
cdan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOJ16_001009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdan03019
]
SOJ16_001009
03016 Transfer RNA biogenesis [BR:
cdan03016
]
SOJ16_001009
Enzymes [BR:
cdan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SOJ16_001009
Messenger RNA biogenesis [BR:
cdan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SOJ16_001009
Transfer RNA biogenesis [BR:
cdan03016
]
Prokaryotic type
tRNA degradation factors
SOJ16_001009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
RIP_P131-like
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WPX09766
LinkDB
All DBs
Position
1076139..1078244
Genome browser
AA seq
701 aa
AA seq
DB search
MESKIYKMELAGRELSFEIGKYALLANGAVLARYGDTAVLVTACASEKPREGINFFPLTV
DYEERLYSVGKIPGGFIKREGKPSEKAILSARLIDRPIRPLFPKDFYHDVSVIATVLSVD
PDNPPDVLAMLGSSVALSISDIPFEGPTGSVLVGYVDGKIVINPTAKEREVSKLHLVVSG
TKDRVMMIEAGAKEVPEDIMLEAIMTAQEEIKKIVEFIEGIVKEVGKPKMEYQKRIVPEE
IKQKVREIAYDKVYQYVQIPDKIERDKKLDELKEEVFKAFEGETEEALLLVDDALYNLEK
EIVRKMIAEEGKRPDGRKFDEIRPLYAEVGILPRTHGSALFKRGYTQVLTVATLGTKGEM
QFLDGLEEEEAKRYMHHYNFPPFSTGESKPVRGPGRREIGHGALAERALEPVIPSEDEFP
YTIRLVSEVLTSNGSTSQASVCGSTLALMDAGVPIKAPVAGISIGLITKDDHSFILLTDI
QGIEDFFGDMDFKVAGTREGITAIQLDIKIHGLTREIIEKALYQAREARLKILDFMQTVI
DKPRSDLSPYAPKIFKTTVDPEKIRDIIGPGGKMINKIIAETNVKIDIEPDGRIFVAAPD
DISGNRAISMIEGIGREIEVGQFFLGKVTRTASYGAFVEIYPGKEGLVHISQLDERRLKS
VDEVVKVGDLVLVKVIGIDKLGRLSLSRKEALNVTYSRKAK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttggagagtaaaatttacaaaatggaacttgcgggaagagagctcagctttgagattggg
aaatatgctcttttggcaaatggggctgtgcttgcaagatatggtgacacagcagtgctt
gttactgcatgtgcttctgaaaaacccagagaaggtataaactttttcccgcttacagtt
gactatgaagagagactgtactctgttggtaaaattccaggtggatttataaagagagaa
ggcaaaccatctgaaaaagcaattctttctgcaagattgattgacagacctataagaccg
cttttcccgaaagatttttatcatgatgtctctgttatagccaccgtactgtcagttgac
cctgacaatccaccggatgttcttgcaatgcttggttcatctgttgcactgtcaatctct
gatattccatttgaaggaccgactggttctgtacttgttgggtatgtggatggaaagatt
gttataaatccgacggcaaaggaaagagaagtgagcaagcttcaccttgttgtatcgggg
acaaaggacagggtaatgatgatagaagctggtgctaaagaagttcccgaagatataatg
cttgaggctattatgacagcacaggaagagataaagaagattgttgagtttattgaggga
atagtaaaagaagttggcaaaccaaaaatggagtatcaaaagaggattgtgcctgaagag
ataaaacaaaaggtacgagagattgcatacgacaaggtttaccagtatgtgcaaataccc
gacaagattgagagggataagaagcttgatgagctcaaagaagaagtgttcaaggctttc
gaaggtgagacagaagaagctcttttacttgtggatgatgctctttataaccttgaaaaa
gagattgtcagaaagatgattgcagaggaaggaaaacgacctgatggtagaaagtttgat
gagataaggccgctttatgctgaggttggtattttgccaagaacacatggttctgcgctg
ttcaaaagaggttacactcaggttttgacagttgcaactcttggtacaaaaggcgagatg
cagtttttagacggtcttgaagaagaagaggcaaaaaggtatatgcatcattataacttc
ccgccgttttctacaggtgaatcaaaacctgtaagaggtccaggaagaagagagatagga
catggtgcattggctgaaagggcacttgagcctgtcattccttcagaggatgaattccct
tacaccattcgacttgtatctgaggttttgacatctaacggttcaacgtcacaggcaagt
gtttgtggcagtactcttgcgcttatggatgctggtgtgccgatcaaagcgcctgttgca
ggaatttctatcggccttattacaaaagatgaccacagttttattttacttaccgacatt
caaggtatagaagacttctttggagatatggactttaaggtagcaggaaccagagaaggt
attactgccattcagcttgacataaaaatccatgggcttacaagagaaattatcgaaaag
gcactctatcaggcaagagaagcaagactcaaaattttggattttatgcagactgtaatt
gacaagccaagaagcgatctttcaccttatgctccaaagatattcaaaactacagttgac
cctgaaaagattcgagatataattggaccaggtggaaagatgattaacaaaatcatcgca
gaaacaaatgttaagattgatatagaaccagacggaagaatatttgtagcagcccctgat
gatatatctggtaacagggcaattagcatgattgagggaattggtcgtgaaattgaagtt
ggtcagtttttccttggcaaggtgacaagaaccgcatcttatggagcgtttgttgaaata
tatcctggaaaagaaggacttgtgcatatatctcaattagatgagagaagattaaagtct
gtagacgaagttgtaaaagttggagatttagtacttgtaaaggtaatagggattgataaa
cttggcagactttcactttcacgaaaagaagcactgaacgtcacatactcaagaaaagca
aaataa
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