Anaerocellum danielii: SOJ16_001017
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Entry
SOJ16_001017 CDS
T09647
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cdan
Anaerocellum danielii
Pathway
cdan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOJ16_001017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdan03400
]
SOJ16_001017
Enzymes [BR:
cdan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOJ16_001017
DNA repair and recombination proteins [BR:
cdan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOJ16_001017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPX09772
UniProt:
A0ABZ0U2U1
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All DBs
Position
1086369..1087223
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AA seq
284 aa
AA seq
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MNIKEYTDFLRISGVEINFDATFFSGQCFRWKKAEYGYIGVVNRKIVLIYPQDSNTFDIY
NCSLDEFKKFFYWYFDLDKDYDLILKELSEHDEILKKAVKRYRGMRLLNQEPFECMISFI
ISQNNNIKRIQMLVERLCQAYGEKIEYRGFSSWTFPEIEDLKKISTEEFKRLGLGYRAEY
IKDAIAKLDEGKIEFESLVSLKSDEAKKILKTVKGIGDKVADCILLYSLQKYDVFPVDVW
VKRALREYYGIENTKQLKQFIKSFGELAGYAQLFLFHYIRNSEK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgaacataaaagaatatacggattttcttcgcataagtggagtagagattaattttgat
gcaacattttttagtggacagtgttttagatggaaaaaggcagaatatggatacatagga
gttgtaaatagaaaaatagttttaatatatccacaggatagcaatacttttgacatatac
aactgttcgcttgatgagtttaaaaaatttttttactggtattttgacttagacaaagat
tatgatttgattttgaaagagctttctgagcatgatgagattttgaaaaaagctgttaaa
aggtatagagggatgagacttttaaatcaagaaccttttgaatgtatgatttcttttatt
atatctcagaataacaacataaaaagaattcaaatgcttgtggaaagactttgccaggct
tatggggaaaaaatagaatacagaggattttcttcttggacatttccagaaattgaggac
ttaaaaaagatttcaacagaagaatttaaacgcttagggttaggttatagagcagagtat
attaaagatgcaattgccaaattagatgaaggtaaaattgaatttgaaagtcttgtatct
ttgaaaagtgatgaagcaaagaaaattttaaaaacggtaaaagggataggagacaaggtt
gctgattgtatattgctatactcactgcaaaaatatgatgtgttccctgttgatgtgtgg
gtgaagcgtgccttgagagaatattatggaattgaaaatacaaaacagctgaagcaattt
ataaagtcgtttggtgaacttgccgggtatgctcagctttttttatttcactatattaga
aatagcgagaaataa
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