Anaerocellum danielii: SOJ16_001218
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Entry
SOJ16_001218 CDS
T09647
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdan
Anaerocellum danielii
Pathway
cdan03030
DNA replication
cdan03430
Mismatch repair
cdan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOJ16_001218
03430 Mismatch repair
SOJ16_001218
03440 Homologous recombination
SOJ16_001218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdan03032
]
SOJ16_001218
03400 DNA repair and recombination proteins [BR:
cdan03400
]
SOJ16_001218
Enzymes [BR:
cdan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOJ16_001218
DNA replication proteins [BR:
cdan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOJ16_001218
DNA repair and recombination proteins [BR:
cdan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOJ16_001218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
WPX09961
LinkDB
All DBs
Position
1276123..1279545
Genome browser
AA seq
1140 aa
AA seq
DB search
MSFVHLHLHTEYSLLDGACRIDRLFERVKDLNMNAVAITDHGAMYGVIDFYKAAKENGIK
PIIGCEVYLAPRTRFDKEPNIDNDIHHLVLLAMDNEGYKNLSKIVSIGFIEGFYYKPRVD
REVLSKYSKGLIALTSCLAGEVPKLILREQKEKLYDTISFYKEVFGENFYFELQYHYIDE
QRFVNNELMRLSKKYQIPLVATNDVHYLKKEDRNLHDILLCIQTGKTISDSNRMEFPTDE
FYLKSPEEMQQLFGYIPEALKNTLEIAEKCNVEFEFGKINLPKFQLPEGKNDTFEYLKEL
ALEGFVKRYPKDDKTAYDRLMMELQVIKDMGFVEYFLIVQDFINYAKQNNIMVGPGRGSA
AGSIVAYCLGITNVDPIKYDLLFERFLNPERISMPDIDIDFCYQRRQEVIDYVTRKYGED
RVSQIITFGTMAARASIRDVGRVLGIPYSQVDEIAKMIPFSPGMTIDKALEINHELKKIY
EQNDTVRKIIDTARNLEGMPRHASVHAAGVVISSCPITDLVPLARTDDAIVTQFPMTTLE
ELGLLKMDFLGLRTLTVIQNTLELVKKNRGIEVDLDRIDYNDKNVYEFISEGSTNGVFQL
ESSGMKQFMKELKPENLEDIIAGISLFRPGPMDQIPVYIQNKNNREKIEYLHPSLEPILN
VTYGCIVYQEQVMQIFRTLAGYSLGRADLVRRAMAKKKADILMEERDRFIEGAMANGINK
ETAEKIFAIIEDFASYAFNKSHAAAYAILAYQTAYLKKYYTIEFMTSLITSVMNSNEKVG
MYIEECRKFGISILPPDINKSSYDFTIEGNSIRFGLRAIKSLGENVISHILKEREEKGEF
KDLYDFIMRVDTNTVNKRIIDNLIRSGAFDFTGINRNSLLASVEDILVLKQAKKKNANQF
SFFEISGNENESFEYKNVPQPTAQQLLKMEKDTIGIYISSHPLERYTEEISKYNITPLSE
ISTMSEEDEYKFEQILVCGILKEVKVKITKNNQTMAFAKLEDLTDSVEVLFFPGVYEKYS
HLIKEDMIILIEAKATFREDEGVKVIAQKVDRLASDKSEETQKNIEKAIAIRVSDDTILK
SKKFLAFVKFFAGKSKIVLYYNQKRLISKSNLCIEINPTVIEQLKEWFGEENVWIEDIDS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcatcttcaccttcatactgaatatagtttgttggacggggcttgtagg
atagatagactttttgaaagagtaaaagatctaaatatgaatgctgtggcaataactgac
cacggagcaatgtatggtgttatagatttttataaagctgctaaggaaaatggtatcaaa
cctataattggatgtgaggtatatttagctccacggactcgctttgataaagaaccaaat
atcgataatgatattcaccaccttgtccttcttgctatggacaatgaaggatacaaaaat
ctttccaagatagtttcaattggatttattgaaggattttattataaaccaagggttgac
agagaagttttgagcaagtattcaaaaggacttatagctcttacaagttgtcttgcaggg
gaggttcccaagctaattttgagggagcaaaaggaaaaactgtatgatacaattagtttt
tacaaagaggtgtttggagagaacttttactttgaacttcaatatcattacattgatgag
caaaggtttgtaaataatgaacttatgaggctatccaaaaaatatcaaatcccactggtg
gcaacaaatgatgttcattatttgaagaaagaagatagaaaccttcatgatatattactt
tgcattcaaacaggaaaaactataagtgactctaaccgcatggagtttccaactgatgaa
ttttatctcaaatcacccgaagagatgcaacaactttttggttacattccggaagcactg
aaaaatacattggagattgctgaaaaatgcaatgttgagtttgagtttggtaagattaac
cttccgaaatttcaactgccagaaggcaaaaatgacacatttgaataccttaaagagtta
gctttagaaggatttgtgaaaagatatccaaaagacgacaaaactgcatatgacaggctt
atgatggagcttcaagtgataaaagatatgggatttgtcgaatattttttgatagttcag
gactttataaactatgctaaacaaaacaacataatggtaggtcctggtagaggttctgca
gctgggagtattgttgcatactgtttgggtattacaaatgttgacccaataaagtatgac
cttctttttgagagatttttaaatccagaaagaatctctatgcctgacatagatattgac
ttttgttatcaaagaagacaagaggtgattgactatgtcactcgcaaatatggagaagat
agagtaagtcagataataacatttggaacaatggcagcaagagcttcaatcagagatgtt
ggaagggttctgggaattccatattctcaggtggacgaaattgcgaagatgattccgttt
tctcctgggatgactattgacaaggcacttgagataaaccatgagcttaaaaagatctat
gaacaaaatgatacagtaagaaaaataattgacacagcaagaaatcttgaaggtatgcca
agacatgcatctgttcatgctgctggtgttgtgatttcaagctgtccaattacagattta
gtgccgttggcaaggactgatgatgctattgttactcagtttccaatgacaactttagaa
gaacttgggcttttgaaaatggattttcttggtttgagaacactgactgtcattcaaaat
acgttggagcttgtgaagaaaaatagaggcatagaggttgatttagataggatagactat
aatgacaaaaatgtttacgagtttatatcagaaggaagcacaaatggtgtattccagctt
gaaagcagtggaatgaaacagtttatgaaagagctaaaacctgaaaacttggaggatatt
attgcaggaatatctttatttagacctggaccaatggaccagattccagtttatatccag
aataagaataacagagagaaaattgaatacctccatcccagccttgaaccaattttaaat
gtcacctatggatgtattgtgtatcaagaacaagttatgcaaattttcagaacacttgct
gggtattcgcttgggagagctgatcttgtgagaagagcaatggccaagaaaaaagccgac
attttgatggaagaaagggataggtttattgaaggagctatggcaaatggaataaataaa
gaaacagctgaaaagatttttgccattatagaagattttgcaagctatgcatttaacaaa
tcacatgctgctgcatatgctatattagcatatcagactgcgtatttgaaaaagtattat
accatagagtttatgacaagcttaattacaagtgttatgaattcgaatgagaaggttgga
atgtatattgaagagtgcagaaaatttggaatatctattttgccgcccgatataaacaaa
agtagttatgacttcacaatcgaaggaaatagtataagatttggactaagagctataaaa
agcttgggagagaacgtcatttcccacatcttaaaagagagagaggaaaaaggtgaattt
aaggatttgtatgattttataatgagagttgacacaaatactgtaaacaaaagaattatt
gataatttgatacgttcgggtgcatttgactttacaggtatcaacagaaattcgctttta
gcctcagtagaagatattcttgtgctaaaacaagctaaaaagaagaatgcaaatcagttt
agtttttttgagatatccggcaacgaaaatgaaagttttgagtacaaaaatgtgcctcaa
ccaactgctcagcagcttttgaaaatggaaaaggatactattggaatatatataagcagt
catccacttgaaaggtacacagaggaaatttcaaaatacaatataactcctctttctgag
atatctactatgtccgaagaagatgaatacaagtttgagcaaatacttgtgtgcgggata
ttaaaagaggtaaaagtaaaaattacaaaaaacaatcagacaatggcatttgcaaagtta
gaagatttgacagattcggttgaggtgttgtttttcccgggcgtttatgaaaaatattct
catctaataaaagaagatatgattatattaattgaggcaaaggcaactttcagagaggac
gagggagtaaaagttattgcacaaaaagtagataggcttgccagcgataaatctgaagaa
actcaaaaaaacatagaaaaagccattgcaataagggtaagtgatgatacaatattaaag
tcaaaaaaattcttagcatttgtaaagttttttgcaggaaagtcaaaaatagttctttat
tataaccaaaaaaggctaatttccaagtcaaacttgtgtatagaaataaatcctacagta
attgaacagctcaaagagtggtttggcgaggaaaatgtttggatagaagatatagattct
tga
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