Caldicellulosiruptor danielii: SOJ16_001284
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Entry
SOJ16_001284 CDS
T09647
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cdan
Caldicellulosiruptor danielii
Pathway
cdan00900
Terpenoid backbone biosynthesis
cdan01100
Metabolic pathways
cdan01110
Biosynthesis of secondary metabolites
cdan03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SOJ16_001284 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SOJ16_001284 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cdan03011
]
SOJ16_001284 (ispH)
Enzymes [BR:
cdan01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SOJ16_001284 (ispH)
Ribosome [BR:
cdan03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SOJ16_001284 (ispH)
Bacteria
SOJ16_001284 (ispH)
BRITE hierarchy
Motif
Pfam:
LYTB
S1
Spt6_S1
DUF1512
Eplus_motif
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WPX10027
LinkDB
All DBs
Position
1336826..1338412
Genome browser
AA seq
528 aa
AA seq
DB search
MIIKVAQSAGFCFGVQRAVEGVLAWAKANKGKSVKIYGMLIHNSYVIDKLKELGIEVVED
IEQIAKEDIIFIRSHGVSMDEYAEIEKRAEKVYDFTCPYVKKIHEIVKEHSENGYDIIVV
GDMNHPEVKGIVGHVSNNRKCFVIDSIEKVKEATNQIEGKAVVVCQTTFDNKKWSDIREF
LESHTNYKVFDTICKATINRQKEAAELAKRVDIMLVVGDKKSSNTNKLYQLLNETKPTFF
IEKVEDLDSIKLDSSAKSIGVTAGASTSPEQIEEVVKYLEEKFNEMNLKDFERLIDRSFS
TVQRGEVVKGRIIKVEEDYVLVDIGYKAEGIIYKNEVIKNGNVNLKDIFKIGETIEAVVI
KESDEEGNVVLSKHRADVLHGFGELLSRYENKEPVRAVVKSIKEKSIVCDFRGTNVYVPI
SQWGEDVQTSDIGKIFEIEITDVNKEKKIAFGSRKPLLKRREEERFIKQIESLDFSREYD
GIVVEIKEKGIMVNFENLRGFVPASEVGHLKRGTDLKKLFEIGRKSQG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaagttgcacaaagtgctggattttgctttggtgttcaaagggcagttgaa
ggcgttttggcatgggcaaaagcaaataagggaaaatctgtaaagatatatggaatgttg
atacataacagttatgtaatagacaaattgaaagaattaggaatagaagttgtggaagat
attgaacaaattgcaaaagaagatataatttttattcgttctcacggtgtttcaatggat
gagtatgccgagattgaaaaaagggcagaaaaggtttatgactttacatgcccatatgtc
aaaaagattcacgagattgtaaaggaacattcagaaaacgggtatgatataattgttgtt
ggagatatgaaccatcctgaagtaaagggaattgtcggccatgttagcaataatagaaaa
tgttttgttatagatagtattgaaaaagtaaaagaagcgactaatcaaattgaaggcaaa
gctgtagttgtatgtcagactacatttgacaataaaaaatggagcgatataagagaattt
ttagagtctcataccaattataaagtatttgacacaatttgcaaggcaacaataaacagg
caaaaggaggcagcagaacttgcaaagcgtgtagacataatgttggtggtcggtgataaa
aaaagttctaataccaacaaattgtatcaacttctgaatgaaacaaaacctacatttttt
attgaaaaggttgaagatttagattcaataaaattagatagcagtgcaaagagtatcggg
gtaacagcaggagcttccacttctcctgagcagattgaagaggtggtaaaatatctggaa
gaaaagtttaatgagatgaatctgaaagattttgagagacttattgatagaagcttttcg
acagtgcaaagaggtgaagttgtaaaaggcaggataataaaagttgaggaagattatgta
cttgttgatattggttacaaggcagagggtataatttacaaaaatgaggttatcaagaat
ggaaatgtaaatttgaaggacatatttaagataggcgaaacaattgaagctgttgtaata
aaagagtcagatgaagaaggaaatgtggttttatcaaaacatcgggcagatgtacttcac
gggtttggagaactgctttcgagatatgaaaataaagagcctgtaagagcagttgtaaag
tcaattaaagaaaaaagcattgtttgtgattttagaggtacaaatgtgtatgtaccaatt
tctcagtggggtgaagacgttcaaacttcggatatagggaagatatttgaaatagaaatt
acagatgtcaacaaagaaaaaaagatagcttttggaagtcgaaaacctttgctaaagcga
agagaggaggagagatttattaaacagatagaatctttagatttttccagagaatatgat
ggcattgttgttgagataaaagaaaaaggtattatggtaaattttgagaacctgcgaggt
tttgtgcctgcaagtgaagttggacatttgaaaagaggtacagaccttaaaaaattattt
gaaattgggcgaaaaagtcaaggttaa
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