KEGG   Anaerocellum danielii: SOJ16_001464
Entry
SOJ16_001464      CDS       T09647                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cdan  Anaerocellum danielii
Pathway
cdan02024  Quorum sensing
cdan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOJ16_001464 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SOJ16_001464 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdan03019]
    SOJ16_001464 (hfq)
   03036 Chromosome and associated proteins [BR:cdan03036]
    SOJ16_001464 (hfq)
Messenger RNA biogenesis [BR:cdan03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SOJ16_001464 (hfq)
Chromosome and associated proteins [BR:cdan03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SOJ16_001464 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: WPX07652
UniProt: A0ABZ0TXP1
LinkDB
Position
complement(1516196..1516486)
AA seq 96 aa
MAKGSLNLQDLFLNQLRKEKVNVTIFLLSGFQLKGTIKGFDNFTLIVETDNNKQQLIYKH
AISSIMPSKPVNYMAQVQNNQQASQQLNNNQSQETK
NT seq 291 nt   +upstreamnt  +downstreamnt
gtggcgaaaggaagtttaaacttgcaggatttatttttaaatcagttaagaaaagaaaaa
gtaaatgttacaattttcctactcagtggttttcagttaaaagggactatcaaaggtttt
gacaattttacattgattgtagaaacagacaataacaagcagcaactaatttacaagcat
gctatatcctcaattatgccctcaaagccagtaaactatatggctcaggtacagaataat
cagcaagcttcccagcaattaaataacaatcaaagtcaggagacaaaatag

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