Caldicellulosiruptor danielii: SOJ16_001844
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Entry
SOJ16_001844 CDS
T09647
Name
(GenBank) cellulose binding domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cdan
Caldicellulosiruptor danielii
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SOJ16_001844
Enzymes [BR:
cdan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SOJ16_001844
BRITE hierarchy
Motif
Pfam:
RGL11_C
RGI_lyase
CBM_3
FG-GAP_3
FG-GAP
Arch_flagellin
Motif
Other DBs
NCBI-ProteinID:
WPX07995
LinkDB
All DBs
Position
complement(1862223..1864751)
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AA seq
842 aa
AA seq
DB search
MLTKKKLNEYVYFVTIIFFMSVILLNGQINVSKSNLAMAATGSQIEKLNRGLIAIKVTNG
VFLSWRMFGSDPANIGFNIYRNGAKITKAPIQNSTNYVDTDGTTSSRYYVRAVINGAEVE
QSEEVSVLNSNYIEIRLNKPANSPLGASYSPNDASVGDLDGDGEYEIVLKWDPSDSKDNS
QSGYTSNVFLDAYKLNGKFLWRIDLGRNIRAGAHYTQFIVYDLDGDGKAEVACKTADGTI
DGQGNVIGNPNADWRNSSGYVLSGPEYLTVFDGATGRAIKTVNYIPPRGNVSSWGDSYGN
RVDRFLAAVAYLDGKRPSLIMCRGYYTKTYIVAWNWQNGDLTKLWQFDTGEIKDGYRDDY
EGQGNHNLSVADVDNDGKDEIIYGAMAVDDNGAPLYSTKLGHGDAMHVTDINPDRPGLEV
WQCHEGSTGASLRDARTGQILVRVLTSGDCGRALAADVDPRYKGLEVWAAGVSIRDCKGN
VISNATPPYNFSIWWDGDLGRELLDKTYIYKWDYNNNRTNTIFTASGCSSNNSTKATPCL
SADIFGDWREEVIFRTSDNNAIRIYTTTTLTNYKIPTLMHNRQYRVSIAWQNVAYNQPPH
VSFYLGYETNVNNIYQYFEGYGQQPTATPSLTPTKTPTPTSVPSPTSTATSTPTPTATPT
PTPIPTPTVTATPTPTPTPTPTPVSTPATSGQIKVLYANKETNSTTNTIRPWLKVVNTGS
SSIDLSRVTIRYWYTVDGDRAQSAISDWAQIGASNVTFKFVKLSSSVSGADYYLEIGFKS
GAGQLQPGKDTGEIQIRFNKSDWSNYNQGNDWSWLQSMTSYGENVKVTAYIDGVLVWGQN
PK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaagaaaaagcttaacgagtatgtatattttgtaacgattattttttttatg
agtgttatattgttaaatgggcagataaatgtgagcaaaagtaatttagcaatggcggca
acgggaagtcaaattgagaagttaaatagaggattaattgcaataaaagtgacaaacgga
gtatttttaagttggagaatgtttggttcagatccagcgaatataggatttaatatttac
agaaatggagcaaagataactaaagcaccaattcagaacagcacaaactacgttgatact
gatggaacaaccagttcgaggtattatgtaagagcagtgataaatggggcagaggtagaa
caatctgaagaagtaagtgtgcttaatagcaattatattgaaataagattaaataaacca
gcgaattctccactcggtgcttcatattcgccaaatgatgcaagtgtcggcgatttagat
ggtgatggggaatatgagattgttctgaagtgggatccaagtgattcaaaggacaactca
caatctggatatacaagcaatgtgtttttagacgcttacaaattaaatggcaaattctta
tggagaattgatttgggtagaaatataagagcaggagcacattatacacaatttatagta
tatgatttagatggtgacggaaaagctgaagttgcatgtaaaacagctgatggaacaata
gacggacaaggcaatgtgataggaaatccaaatgctgattggcggaattcgtctggctat
gttttatcaggtcctgaatatttgaccgtatttgatggtgcgacaggaagagcaataaag
acagttaattatattccgccgcgtggaaatgtttcatcatggggcgattcatatggaaac
agggttgacaggtttttagcagcagtagcttatttggatgggaagaggcctagccttatt
atgtgccgaggatattacacaaagacatatatagttgcttggaattggcaaaatggcgat
ttaacaaagttatggcaatttgacacaggagagattaaagatggatatagagatgattac
gaaggtcaaggaaaccacaatttgagtgtagctgatgttgacaatgatggtaaggatgaa
ataatatacggcgcgatggcagtagatgataatggagcaccgttatattcaaccaaatta
gggcatggggatgcaatgcatgtaacagatattaacccagacagacccggattagaagtt
tggcagtgtcatgaaggaagcacaggagcgagtttaagagatgcgcgaactgggcagata
ttggtgagagttttgacatctggagattgtgggcgtgcattggcggcagacgttgatccg
agatataaggggttagaagtgtgggcagcaggggtaagtattagagattgtaagggaaat
gtaatcagtaatgcgacaccaccatataacttttcaatttggtgggacggagatttaggc
agagaattattggataaaacatatatttacaaatgggattataacaataatagaacaaac
acaatatttacagcaagtgggtgttcatcaaataacagcacaaaggcaacaccctgcctg
agtgcagatatatttggagattggcgtgaagaggttatatttaggactagtgataacaat
gcaatcaggatatatacaaccactacattgacaaattataagattcctacgcttatgcac
aacaggcaatatagggtgtctatagcatggcagaacgttgcatataatcaaccacctcac
gtaagtttttatttaggatatgagactaatgtgaacaacatatatcaatattttgaaggg
tatgggcaacaaccaaccgctacaccgtcgctaaccccgacaaaaaccccaacgcctaca
tcagttccatcaccaacatcaactgcaacatctacgccaactccaacagcaacaccgact
ccaaccccgataccgacaccaacagtaacagcaacaccgacgccaacaccaacaccgacg
ccgacacctgttagcacacctgcgacaagcgggcagataaaggtattgtatgctaacaag
gagacgaacagcacgacaaacacgataaggccgtggttgaaggtagtgaacactggaagc
agtagtatagatttgagcagggtaacgataaggtactggtacacagtagatggggacagg
gcacagagtgcgatatcagactgggcacagataggagcaagcaatgtaacattcaagttt
gtgaagctgagcagtagcgtaagtggagcggactattacttggagataggatttaagagt
ggagcggggcaattgcagcctgggaaggacacgggagagatacagataaggtttaacaag
agtgactggagcaattacaatcaggggaatgactggtcatggttacagagcatgacgagt
tatggagagaatgtgaaggtaacggcgtatatagatggtgtgctggtatggggacaaaat
ccaaaataa
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