Anaerocellum danielii: SOJ16_002298
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Entry
SOJ16_002298 CDS
T09647
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdan
Anaerocellum danielii
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdan03032
]
SOJ16_002298 (topA)
03400 DNA repair and recombination proteins [BR:
cdan03400
]
SOJ16_002298 (topA)
Enzymes [BR:
cdan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOJ16_002298 (topA)
DNA replication proteins [BR:
cdan03032
]
Prokaryotic type
DNA Topoisomerases
SOJ16_002298 (topA)
DNA repair and recombination proteins [BR:
cdan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOJ16_002298 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_3
Zn_Ribbon_TF
HVO_2753_ZBP
Toprim_4
Auto_anti-p27
DUF2740
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WPX08417
LinkDB
All DBs
Position
complement(2329269..2331350)
Genome browser
AA seq
693 aa
AA seq
DB search
MKKLVIVESPAKAKTIAKYLGKEFKVEASMGHVRDLPKSDLGVDIENGFAPRYINIRGKA
DVINRLKKSAEAAEKVYLATDPDREGEAISWHLATILGIDMNDNVRITFNEITKKAVQES
LKNARPIDQNLVNAQQARRVLDRLLGYKLSPFLWEKVKGGLSAGRVQSVATRLVVEREEE
IENFKPEEYWTLEAVFKKDAQEFKAKFYGDKKGKIELKNQEQVQRIEEKIKNKEFKVVKI
KISEKKKNPPPPFITSTLQQEASRKLRFTPAKTMAVAQMLYEGVEIKGEGNVGLITYMRT
DSTRISEEAQQAARNLIMQKFGKEYLPEKPRVYKTKKDAQDAHEAIRPTYLEMDPESIKD
SLTPDQYKLYKLIYDRFLASQMESSIYEVLSAELEVEGYVFKLTGSKLKFAGFMEVYVEG
KDTEDEEEENQLPEIREGEALNPIKLESKQHFTQPPSRYTEATLIKALEEKGIGRPSTYA
PTIQTILERGYVVKEDRSLKPTELGKLVTNILKEYFKDIIDIEFTAELESNLDKIEEGKL
DWTEVVKKYYQPLEKELEIARATLLKVKVEDEETDIVCENCGRKMVIKKGKYGKFLACPG
YPECKNTKPYYDYLDVVCPNCGKRIIERKSKKGKRYYTCEGYPGCDLILWEKPAKNCPKC
KSIMFEKGKKGNKKFICSNENCAYEEKIGEKGE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaacttgtcattgtagagtcacctgcaaaggcaaaaacaattgcaaagtatctt
ggcaaagagtttaaggtagaagcttcaatgggacatgtcagagaccttcccaagagcgat
ttgggggttgacatagaaaatggttttgcgcccaggtatatcaacatcagaggtaaggca
gatgtgataaacaggctcaaaaaatctgctgaggcggctgaaaaagtctaccttgcaaca
gaccccgacagggaaggtgaggcaatttcgtggcatttggccactattttagggattgat
atgaacgacaatgtgagaattacattcaatgagataacaaaaaaagctgtccaggaatct
ttgaaaaatgcaaggccaattgaccagaaccttgtcaatgcccagcaggcacgaagagta
cttgacaggttgctcggttacaagcttagtccctttttgtgggaaaaagtaaaaggagga
ctgtctgctggaagagtgcagtctgttgcgacaaggcttgtggttgaaagggaagaggag
atagaaaattttaagcctgaagagtactggaccttagaagcggtatttaaaaaagatgcc
caggagtttaaagcaaagttttatggagataagaaggggaagattgagcttaagaaccag
gaacaggtccaaagaattgaagaaaagataaaaaacaaagagttcaaggttgtaaagata
aagatatcagaaaaaaagaaaaatcctcctccaccttttatcacgagcacccttcaacag
gaggcgtcaagaaagctgaggtttactcctgcaaagacaatggcagttgcccagatgctg
tatgagggtgttgaaataaaaggagaaggaaatgtcggtcttataacatacatgagaaca
gactcaacaagaatttcggaggaggcacagcaggcagcacgaaaccttattatgcagaaa
tttggcaaagaatatcttcccgaaaagccaagggtttacaaaacaaaaaaagatgcgcag
gacgctcatgaggcaataagaccaacctacttagagatggaccctgagagtataaaagat
tctttgacacctgaccagtataagctgtacaagctcatttatgacaggtttttagcgtca
cagatggaaagtagcatatatgaggttctttcagccgagcttgaagtagaaggctatgtt
ttcaagctcacagggtcaaagctcaagtttgctgggtttatggaagtatatgtcgaaggc
aaagatacagaggatgaagaagaggaaaatcagcttccagaaattagagaaggggaagct
ttaaatcctataaaacttgagagcaaacagcattttacccagccgccttcacgctacact
gaagcaaccttaataaaggctttagaagaaaaaggtataggaagaccaagcacatacgct
ccaacaatccagacaattctggagagaggatatgttgtcaaagaagacaggtccttaaaa
ccaacagagcttggcaaacttgtaacaaatatacttaaagagtatttcaaagacataatt
gacattgaatttactgcagagctcgaaagcaaccttgacaagattgaggaaggaaaactt
gattggactgaagttgtcaaaaaatactaccagccgcttgaaaaggaacttgaaatagca
agagctaccttattaaaggttaaggttgaggatgaggagacagacattgtatgcgaaaac
tgtggaagaaagatggtgataaaaaaaggcaaatacggtaagttcctggcatgtccagga
tatcctgaatgcaaaaatactaaaccatattacgattaccttgatgtggtatgtccaaat
tgcggcaagagaataatagaaaggaagtccaaaaagggcaagagatattacacatgcgaa
gggtatcctggctgtgacctcattttgtgggaaaaaccagccaaaaactgtccaaagtgc
aaaagtatcatgtttgaaaagggcaagaaggggaataaaaagtttatatgttcaaatgaa
aactgtgcttacgaagaaaaaataggggaaaaaggtgagtaa
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