Caldicellulosiruptor danielii: SOJ16_002504
Help
Entry
SOJ16_002504 CDS
T09647
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cdan
Caldicellulosiruptor danielii
Pathway
cdan00052
Galactose metabolism
cdan00511
Other glycan degradation
cdan00600
Sphingolipid metabolism
cdan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SOJ16_002504
09103 Lipid metabolism
00600 Sphingolipid metabolism
SOJ16_002504
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SOJ16_002504
Enzymes [BR:
cdan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SOJ16_002504
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Bac_rhamnosid_N
Motif
Other DBs
NCBI-ProteinID:
WPX08606
LinkDB
All DBs
Position
2543396..2546476
Genome browser
AA seq
1026 aa
AA seq
DB search
MLDKNYYQNPKIKHINREEPRSSFIPFDNPQKALENEWELSNHFRLLNGKWYFKLFEKPC
MVTEDIILADTESCNFDQIIVPSNFQMFGYDIPIYTNTRYPIPVDPPFVPDINPTGVYKR
EFYISEQDLDKEIFVVFEGVDSAFYVYINGKFAGFSKVSHMMHEFDITRFVQEGRNTITA
IVLKYSDGTYLEDQDKWRMSGIFRDVYLLLRPKVFVRDVYLKPTLSDDLKEGYLTAEIEI
ENRSNSQKEFSIEVQVFFDKTLIKSSNKVSRLSANTQTSLAFEFQIESPRLWSAELPNLY
TLIVVLKDTCGDILEIIPQNFGFRKIEIKDGVFYLNNVPIKLKGVNRHDMHPRVGFAVTR
KMMQEDITLMKQHNINCVRTSHYPNHPYFLELCDKFGIYVIDEADLETHGFGAVGDWGLL
AKDPVWEDAFVERAKMMVKRDKNHPSIIMWSLGNESGYGPNHDKMAQWIRSYDNSRPIHY
ESARDAEVVDIVSVMYPPVEKLEEEGKKQESRPFFMCEYAHAMGNGPGNLKEYWDVIYKY
PRLLGGCVWEWADHGILTKTPDGKQYYAYGGDFGDEPNDGNFCIDGLLFPDRTPSPAMFE
LKKVYEPVVFELLDKEKGIFKVTNRYDFISLSNIEVEWELLSGGKVVKEGFVDVSDVLPH
SSKEVKINEVKEVLESSRKELSITFTAKLKNSMPWVKRGFVITKSQIALKEDTPQDAVQK
IEKVNVILSKQNRFEVVNSPDKVEVFADSTLVEFCRWTGDLISLKHNGLDFIKSSPRFNL
WRAPTDNDVHIKNEWIKAGFDKLQRRIVNVSFEEHSQYFKAESTAVYGAYSVKPVFEVTT
SYKVFKSGIVETNVYAQALRQLPPLPKIGLQFIMPKEFEYVKYYGRGPHENYPDIKQSAT
VKIYDMAIKDMYVPYIMPQEYGNRCDVRWAFVYNIYGIGLCIKGIPTFNFSAREYTDDVL
TKAKHTYELTKADGIVVNVDFKIGGIGSQSCGPGPLEKYLIKDDKFEFCFYMIPVDSNSL
DIEKLW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacaaaaattactatcaaaatccaaaaattaagcatataaacagagaagagcca
agaagttcttttataccttttgataatcctcaaaaagctttagaaaatgaatgggagctt
tcaaatcatttcaggctattgaatggaaaatggtattttaaactttttgaaaagccatgc
atggtgacagaggatataatcttggcagatacagaaagttgtaattttgaccagattatt
gtcccaagtaactttcagatgtttggctatgacataccaatttatacaaataccagatat
cccatccctgttgacccaccgttcgtaccagatataaacccaacaggtgtctataaaagg
gagttttatatttccgagcaggacttagacaaagaaatatttgttgtatttgaaggggta
gactcagcattttatgtatatataaatggtaagtttgccggcttttctaaggtctctcac
atgatgcatgagtttgacatcacaagatttgtccaagaaggaagaaatactatcacagct
atagttttaaaatattcagatggaacctacttagaagaccaagacaaatggcgaatgagt
ggaatattcagagatgtatatcttcttttgcgaccaaaggtatttgtaagagatgtgtat
ttaaaaccaactttgagtgatgacctcaaagaaggatacttgactgctgagattgaaatt
gaaaacagaagtaatagccaaaaagaattcagtatagaggtacaagttttctttgataaa
actttaatcaaaagctcaaacaaagtatcaagactttctgcaaatactcagacttcttta
gcttttgaatttcaaattgaaagtccaagactatggagtgcagagctaccaaatctttat
acattaattgtagtattgaaagatacctgcggcgacattttggaaattattcctcaaaac
tttggatttaggaaaatcgaaataaaagatggcgtgttttacctaaataatgttccaatt
aaactcaaaggtgtcaacaggcatgacatgcacccgagagttggatttgcagtgacaaga
aagatgatgcaagaggacataacattgatgaaacagcacaatataaactgcgtaagaact
tcccactatcccaaccatccttattttttagagctgtgtgataaatttggaatttatgtg
attgatgaagctgacttagaaacgcacggatttggagcggttggtgactggggacttttg
gcaaaagacccagtgtgggaagatgcgtttgtagaaagagcaaagatgatggtaaagagg
gacaaaaaccatccttcaatcatcatgtggtcgcttggaaatgaatctggctatggccca
aatcatgataaaatggcacagtggataaggtcatatgataatagccggcctattcattat
gaaagtgcccgtgatgctgaagttgtggatattgtaagtgtcatgtatccaccagtagaa
aaacttgaagaagagggcaagaaacaagaaagtcgaccatttttcatgtgtgaatatgca
cacgcaatgggaaacggtcctggaaacctcaaagagtactgggacgtgatatacaaatac
ccaaggcttttaggtggatgtgtgtgggagtgggcagaccacggaattttgacaaagaca
cctgatgggaaacagtattatgcctacggcggggattttggagatgagccaaacgacggt
aacttctgtatagacggacttcttttccctgacagaactccatcgccagctatgttcgag
ctcaagaaagtttacgaaccagttgtttttgagcttttagataaagaaaaaggaattttc
aaggtcacaaacagatatgactttatttctttgagcaacattgaagttgaatgggagctt
ctgtcaggtggcaaagttgtgaaagagggctttgttgatgtgagcgatgttcttccccac
tcttcaaaagaggtcaaaatcaatgaagtcaaagaagttttagaaagcagcagaaaagaa
ctttctattaccttcacagcaaagctcaaaaactcaatgccttgggtaaaaagaggtttt
gttataacaaaatctcagattgcactcaaagaagacactcctcaagatgccgtgcaaaaa
attgagaaggtaaatgttattttatcaaagcaaaacaggtttgaagtggtaaattctcct
gacaaagttgaggtttttgctgacagcactttagtagagttttgcagatggacaggtgat
ttgataagcctgaagcacaacggccttgattttataaaatcctcgccaaggttcaatctt
tggagggctccaacagacaacgatgtgcacatcaaaaatgaatggataaaagctggattt
gacaagcttcaaagaagaattgtaaatgtcagctttgaagaacacagccagtattttaaa
gcagaatcaactgcagtatatggcgcatattcagtaaagcctgtatttgaagtgaccaca
agctacaaggttttcaaatcgggaattgtagagacaaatgtgtatgcacaagctctcaga
cagcttccgccacttccaaagataggactgcagtttataatgccaaaagagtttgagtat
gtcaaatattacggaaggggacctcatgaaaactatcctgatataaaacagagcgcaact
gtaaaaatatatgacatggctataaaagacatgtacgttccatatataatgccccaggaa
tatggaaacaggtgcgacgttagatgggcttttgtatacaatatatacggaataggactt
tgtattaaaggcatccctacatttaacttcagcgcaagagaatatacagatgatgtgctc
acaaaagcaaaacacacgtatgagctgacaaaagcagatgggattgttgtgaatgtggac
tttaagattggtggtattggaagccagagctgtggccctggtccgcttgaaaaataccta
atcaaagatgacaaatttgaattttgtttttatatgataccggttgacagcaatagtttg
gatattgaaaagctgtggtaa
DBGET
integrated database retrieval system
