Anaerocellum danielii: SOJ16_002716
Help
Entry
SOJ16_002716 CDS
T09647
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cdan
Anaerocellum danielii
Pathway
cdan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SOJ16_002716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdan03400
]
SOJ16_002716
Enzymes [BR:
cdan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SOJ16_002716
DNA repair and recombination proteins [BR:
cdan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOJ16_002716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
nSTAND3
PIF1
AAA_22
DEAD
AAA_12
NAT10_TcmA_helicase
AAA_24
SLFN-g3_helicase
T2SSE
NPHP3_N
AAA_29
NTPase_1
PhoH
ATPase_2
ABC_ATPase
WHD_HELB
AAA
AAA_23
HHH_2
AAA_25
MeaB
ABC_tran
HerA_C
UvrD_C
AAA_28
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
WPX08805
UniProt:
A0ABZ0U3G9
LinkDB
All DBs
Position
complement(2778350..2780575)
Genome browser
AA seq
741 aa
AA seq
DB search
MQQNIQGMVSDIIYRNLENNYTVFEIICDDEVFTAVGIVPDIAIGEKVSVYGEFYVHPVY
GQQLKVSYLEKLLPQTKDEIYLYLASGVIKGIGQKTAKKIVDTFGDDTARVLQEEPEKLL
TIRGMTPEKVERIRNMFAFQKFLKDIMSIFSQYGLSQNHAMRLFKLHGFSALSLLQENPY
FLLDVFPELDFKKVDRLALDMGIMPDDRRRISAKILNLLTLAANSEGHTCLPENKLKQLC
IKTLDLPVEKIEEALEALEEERRIVKDEVESQMMVFLYGYYECERYIADKILSMLKEYDD
IADIEEKISLFEEKNGITFSPNQKKAIKMALTQGVSIITGGPGTGKTTIIKCIIQIFEGE
GKKVFLCAPTGRAAKRMQSACEREAKTIHRLLEMTVLDTHVIFQRGPGNPLKCEVIVVDE
MSMVDSFLMNYLLAATKPTTRIVLVGDKDQLPSVGAGNVLKDLIKSQIVPCTTLTEVYRQ
SESSFIVINAHRINRGEFPHLQKESDFYFIQKNSQEEILKTVVELVVKKLPNYLSCNPMT
DIQVLCPSKKGIVGMYNLNRVLQKYLNPPHPSKKEYAYKENLFRVGDKVMQVKNNYSLEY
EVVQGEEKGRVSTGIFNGDIGVVKDIDRAQGVLEILFDDEKLVYYDFSLLDDLELAYAMT
VHKSQGSEFKCIVMPVVETYPILMTRNLLYTAVTRAKELVVLVGKKSALEYMIANQKEAM
RYSALCDFLLHGQSNMQLQVL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaacattcaaggcatggtaagcgacataatctacaggaatttggaaaacaac
tatacagtatttgagataatctgcgatgatgaagtgttcactgcagtagggatagtccca
gacattgctattggtgaaaaggtaagcgtgtacggagagttttatgtccatcctgtttac
ggtcagcagctgaaagtaagctaccttgagaaacttttgccacagacaaaagatgagata
tacttgtaccttgcgtcaggtgtgattaaaggtatcggacagaagactgcaaagaagatt
gttgatacctttggagatgacaccgcaagggtcctgcaggaagagccagaaaaacttttg
actattcgtggcatgacacctgaaaaggttgagcggataagaaacatgtttgcgtttcag
aaattcctaaaagatatcatgtcaatcttttcacagtacgggctttcacagaaccacgct
atgaggctatttaaactccatggattttctgctctgtcacttttgcaggaaaatccatat
tttcttttagatgtgttcccggaacttgactttaaaaaggtggacaggcttgcacttgac
atgggaattatgccagatgacagaagaagaatttctgccaagattctaaatcttttgaca
ctggcagcaaatagtgaagggcacacctgcctgccagaaaacaagctcaaacagctttgt
atcaaaacacttgaccttccagtagaaaaaattgaagaagcgcttgaagctttagaggaa
gaaagaagaattgtgaaagatgaagtcgaatcacaaatgatggtgtttttgtatggctac
tatgaatgcgagaggtatatagcagataagatcctgtcaatgctaaaagaatatgatgac
attgctgatatagaagaaaaaatttcgctgtttgaagaaaaaaatgggattacattttcg
ccaaatcagaagaaagctatcaaaatggcactgactcaaggtgttagcataataacaggc
ggtcctggcacagggaagaccacaatcataaagtgcatcattcagattttcgaaggtgaa
ggtaaaaaggtttttctttgcgcaccaacaggaagagctgcaaagaggatgcaatcagcc
tgcgaaagagaagcaaagaccattcataggcttttggaaatgacagttttagacacacat
gttattttccaaagaggaccgggcaatcccttaaaatgcgaggtcatcgtggttgatgag
atgagcatggtggacagtttccttatgaactatcttcttgctgcaacaaaacccacaaca
agaattgtgcttgtcggagacaaagaccagcttccatctgttggtgcaggaaatgtttta
aaagaccttataaaaagccaaattgtgccgtgcacaactttgacagaggtgtatcgccag
agcgaaagcagttttatagttatcaatgctcacaggataaacagaggtgagtttccgcat
cttcaaaaagagagcgatttttattttatccagaaaaactctcaggaagagattttgaaa
actgtggttgaacttgtggtaaaaaaacttccaaactatctttcgtgcaacccgatgaca
gacattcaagttttgtgtccttctaaaaaaggaattgtcgggatgtacaatctaaacagg
gtattgcaaaagtatctcaacccacctcatccatctaaaaaggagtatgcttacaaagaa
aatctgttcagggtaggagacaaggttatgcaggtgaaaaacaactattcgctggaatat
gaggttgtgcaaggagaagaaaagggcagggtctcaacagggatattcaacggtgacatt
ggagttgtcaaagatatcgacagggcacaaggtgttttagagattctgtttgacgatgaa
aagcttgtgtactatgacttttctctgcttgacgacttagagcttgcatatgctatgact
gttcacaaatcgcaagggtcagagtttaaatgcatagtaatgccggttgttgagacctac
cccattttgatgacaagaaaccttctttacactgccgtcacacgggcaaaagaacttgtt
gtgctggtgggcaaaaaaagcgccttagagtatatgatagcaaaccaaaaagaggctatg
cgatactcagcactttgcgactttttactgcacggacaatcaaatatgcaattgcaagtt
ttatga
DBGET
integrated database retrieval system
