Cedecea davisae: ACG1VR_10705
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Entry
ACG1VR_10705 CDS
T11677
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdav Cedecea davisae
Brite
KEGG Orthology (KO) [BR:
cdav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdav03032
]
ACG1VR_10705 (topA)
03400 DNA repair and recombination proteins [BR:
cdav03400
]
ACG1VR_10705 (topA)
Enzymes [BR:
cdav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACG1VR_10705 (topA)
DNA replication proteins [BR:
cdav03032
]
Prokaryotic type
DNA Topoisomerases
ACG1VR_10705 (topA)
DNA repair and recombination proteins [BR:
cdav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACG1VR_10705 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
HVO_A0261_N
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XJO96620
LinkDB
All DBs
Position
2163548..2166145
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTTKKSADSAAAKGTKKVK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVNELKALAEKADHIYLATDLDREGEAIA
WHLREVIGGDDTRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEIDANLATPKGDALPMQVSH
HLDKPFRPVNREQTMAAVSLLEKARYTVLDREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGFIEESFGKKYLPADANQYASKDN
SQEAHEAIRPSDVNVQAEALKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVEAGEY
RLKARGRTLRFDGWTKVMPALRKGDEDRTLPPVNPGETLSLVELLPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRTENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANNQAEWKAVLDNFFSDFSGQLEKAEQDPEEGGMRPNQMVLTSIDCP
TCSRQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQEDPEGNKAVVRFSRKTKQQYV
ASEKEGKATGWSAFFVEGKWVVGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaacaaatat
ctcggtaatgactacgtggttaagtccagcgtcggtcacatccgtgatttgccgaccagt
ggatcaaccaccaagaagagcgctgactctgccgccgccaaagggaccaaaaaggtcaaa
aaggatgaacgcggagcgctcgtcaaccgtatgggcgttgatccatggcataactgggat
gctcattacgaagtcctgccgggcaaagagaaagtggtcaacgagctgaaagctctggca
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcg
tggcacctgcgggaagttatcggcggcgacgacacgcgctacagccgcgtggtctttaac
gaaattaccaagaatgcgattcgccaggcgtttgaaaagccgggcgaactgaatattgac
cgcgttaacgcccagcaggcgcgccgcttcatggaccgcgttgtgggttacatggtttcg
cctctgctgtggaagaaaattgcgcgtggcctctccgcagggcgcgttcagtccgtagcg
gttcgcctggtggttgagcgtgagcgcgagattaaagcgtttgtgccggaagagtattgg
gaaatcgatgcgaatctggcgacgccgaagggcgatgctctgccgatgcaggtcagtcac
catcttgataagccgttccgtccggttaaccgcgagcaaactatggcggcggtcagcctg
ctggagaaagctcgttataccgtgctggatcgcgaagataaaccgaccagcagcaagcct
ggcgcgccgtttatcacttccacgttgcagcaggccgcaagtacgcgcctgggcttcggc
gtgaagaaaaccatgatgatggcgcagcgcctctatgaagcgggccacatcacctacatg
cgtactgactcaaccaatctgagccaggatgcggtgagcatggtgcgcggttttatcgaa
gagagcttcggtaaaaaatatctgccggcggatgcaaaccagtacgccagcaaagacaac
tcgcaggaagctcacgaagcgatccgtccttcggatgtgaatgtccaggccgaagcgctg
aaagatatggaagccgacgcccagaagctgtatcagctgatctggcgccagtttgttgcc
tgccagatgacgccggcgaaatacgactccaccacgctgacggtcgaagcgggcgagtat
cgcctgaaggctcgtggccgtactcttcgctttgacggctggacgaaagtgatgcctgcg
ctgcgtaagggcgatgaagatcgcaccctgccgccggtgaacccgggtgaaacgctttcg
ctggttgagctgctgcctgctcagcactttaccaaaccgcctgctcgctttagcgaagct
tcgctggttaaagagctggaaaaacgcggtattggccgcccgtctacctacgcttctatt
atctccaccattcaggatcgtggttacgtgcgcactgaaaaccgccgtttctacgccgag
aagatgggggagattgttaccgaccgtctggaagagaacttccgcgagctgatgaattac
gacttcaccgcgcaaatggaagacagcctggaccaggtggcaaacaatcaggccgaatgg
aaagccgtgctggataacttcttcagcgacttcagcggccagctggaaaaagccgagcag
gatccggaagaaggcgggatgcgcccgaaccaaatggtgctgaccagcattgactgtccg
acctgtagccgccagatggggatccgtaccgccagtaccggcgtgttcctcggctgttcg
ggctatgcgttgccgccgaaagagcgctgcaaaaccaccatcaacctggtgcctgagaac
gaagttctcaacgtgctggaaggtgacgacgcggaaactaacgccctgcgcgccaaacgt
cgctgccagaaatgcggcacggcgatggacagctaccttatcgatcctaagcgcaagctg
cacgtctgcggtaataacccgacctgcgatggctacgagattgaagaaggtgagttccgc
attaagggttacgacggcccagtcgttgagtgtgagaaatgtggttctgaaatgcacctg
aaaatggggcgcttcgggaaatacatggcctgtaccaacgaagagtgtaaaaacacccgt
aagatcctgcgtaacggcgaagttgctccgccgaaagaagatccggttccgctgcctgaa
ctgccgtgcgagaagtctgatgcttacttcgtactgcgtgacggggctgccggcgtcttc
ctggctgcgaatactttcccgaaatcgcgtgagacgcgtgcgccgctggtggaagagctt
taccgcttccgcgatcgcctgccggagaaactgcgctacctggccgatgcccctcaggaa
gatcctgaaggcaataaagccgtagtgcgctttagccgtaagaccaagcagcagtacgtg
gcttccgaaaaagagggcaaagctaccggctggtccgccttcttcgtggaaggcaagtgg
gttgttggcaagaaataa
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