KEGG   Cedecea davisae: ACG1VR_16565
Entry
ACG1VR_16565      CDS       T11677                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
cdav  Cedecea davisae
Pathway
cdav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACG1VR_16565 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdav03400]
    ACG1VR_16565 (uvrB)
DNA repair and recombination proteins [BR:cdav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACG1VR_16565 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACG1VR_16565 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD SBDS_domain_II AAA_30 UB2H AAA_22 DUF87
Other DBs
NCBI-ProteinID: XJO93428
LinkDB
Position
complement(3469118..3471133)
AA seq 671 aa
MSKAFKLNSAFKPSGDQPEAISRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLTELQ
YTRNDQAFQRGTFRVRGEVVDIFPAESDDLALRVELFDEEVERLSLFDPLTGQISQTIQR
FTIYPKSHYVTPRERIVQAMEDIKVELADRRKVLLADNKLLEEQRIAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELDKSGSEIVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITASMEKAIGETERRREKQQRYNEEHGITPQGLNKRVVDVLKLG
EGMAKTKGRMKTKARSVIEDDEIVLTPKALQQKIHQLEAKMLEHAQNLEFEEAAQIRDQL
HQLRELFIAAS
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgagtaaagcgttcaaacttaattctgcatttaaaccttcaggcgaccagcctgaggcc
attagtcgcctgaaagaagggctggaagatggcctggcgcaccagacgctgcttggcgtt
acgggttccggtaaaaccttcaccgtcgcaaacgttattgctgacttgcagcgtccaaca
atggtgctggcgcctaataaaacgctggctgctcagctgtacggcgagatgaaagagttt
ttcccggacaatgcggttgagttttttgtctcttactacgactactaccagccggaagcg
tacgtccccagctccgatacttttatcgagaaagatgcttcggtgaacgaacatatcgag
cagatgcgcctgtctgccactaaagcgctgctcgaacgccgggacgtgattgtggtggct
tcggtttcggcaatttacggtctgggcgatccggatctctatttgaagatgatgctgcac
ctgacgaagggcatgataatcgatcagagagcgatccttcgccgcctcaccgaactgcaa
tacacgcgcaacgatcaggctttccagcgcggtactttccgcgtgcggggagaggtggtc
gatatcttcccggcagagtcagatgacctggcgctgcgcgttgaattatttgatgaggaa
gttgaaaggctgtctttgttcgatccgctgacgggccaaatttcccaaaccatccagcgc
tttaccatctatccaaagtcgcattacgttaccccgcgagagcgtatcgtgcaggcgatg
gaagacattaaagttgagctggccgaccgccgtaaggtgctgctggccgacaataaactg
ctggaagaacagcgtattgcccagcgtacccagttcgatctcgagatgatgaacgagctg
ggttactgctctgggattgaaaactactcccgctatctttccgggcgcgggcctggcgag
ccgccgccgacgttgtttgactatctcccggcggacgggctgctggtggtggatgagtcc
cacgtgaccattccacaaatcggcggtatgtatcgcggtgaccgcgcgcgtaaagagacg
ctggtggaatatggcttccgcctgccgtcggcgctggataaccgcccgctgaagtttgaa
gaattcgaggcactcgcgccgcaaaccatttatgtttctgcaacgcccggcaactacgag
ctggataaatccggcagtgaaattgtcgatcaggtggtgcgtcctacagggctgctggat
ccgattattgaagtgcgtccggtggcgactcaggttgacgatctgctgtcggaaatccgc
aagcgcgttgccatcaacgagcgcgtgctggttaccacgctcaccaaacgcatggcggaa
gatcttaccgaatatctggaagagcacggcgagcgcgtgcgctatctgcactcggatatc
gacaccgtcgaacgcatggaaataatccgcgatctgcgtctcggcgagtttgacgtgctg
gtagggatcaacctgctgcgagaaggcctggatatgccggaagtctcgctggtggcgatt
ctcgatgccgataaagagggtttcctgcgttccgagcgttcgctgatccagacgattggc
cgcgccgcgcgtaacgttaacggtaaagccattctctacggcgataaaattaccgcctcg
atggagaaggccattggcgagaccgagcgccgccgcgagaaacagcagcgctacaacgaa
gagcacggcattacgccgcagggcctgaataaacgcgtggtggacgtgctgaagcttggc
gaaggcatggctaaaactaaaggcaggatgaagaccaaagcgcgcagcgtgattgaagat
gatgaaatcgtcctgacgccgaaagcgctccagcagaaaattcatcagctggaagcgaaa
atgctggagcatgcgcaaaatctggagtttgaggaggcggcgcagattcgcgaccagctt
catcagctgcgagagttgtttatcgccgcttcctga

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