Cedecea davisae: ACG1VR_22020
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Entry
ACG1VR_22020 CDS
T11677
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cdav Cedecea davisae
Pathway
cdav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACG1VR_22020 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdav03019
]
ACG1VR_22020 (recQ)
03400 DNA repair and recombination proteins [BR:
cdav03400
]
ACG1VR_22020 (recQ)
Enzymes [BR:
cdav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACG1VR_22020 (recQ)
Messenger RNA biogenesis [BR:
cdav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACG1VR_22020 (recQ)
DNA repair and recombination proteins [BR:
cdav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACG1VR_22020 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF6972
Motif
Other DBs
NCBI-ProteinID:
XJO94432
LinkDB
All DBs
Position
complement(4606009..4607838)
Genome browser
AA seq
609 aa
AA seq
DB search
MTQAEVINQASLARQVLQETFGYQQFRPGQETIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVFGALTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRTGQIRLLY
IAPERLMMDNFIDHLSNWQLSMVAVDEAHCISQWGHDFRPEYAALGQLRERLPAVPFVAL
TATADDTTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLTRYIQEQRGKSGI
IYCNSRAKVEDIAARLQSKGVSAGAYHAGLEHQVRGEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVAHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRKCLEEKAPGAL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACGNCDICLDPPRRYDGLMDAQKAL
SCIYRVGQRFGMGYVVEVLRGSNNQRIRDLGHDKLKVYGEGRDHTTEHWVSVIRQLIHLG
VVTQNIAAHSALQLTEAARPYLRGEEPLMLAVPRVVVLKPRASQKVFGGNYDRKLFAKLR
KLRKSIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTMIR
DHVDGVDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaggcggaagtaatcaatcaggcgtcgctggcaaggcaggttttgcaggaaacc
ttcgggtatcagcaattccgtccgggccaggaaaccatcatcgatacggtgctggagggg
cgtgactgcctggtggtaatgccgaccggcggcggtaaatcgctgtgctatcaaatacct
gctctggtatttggcgcccttaccgtagtggtctctccgcttatttccctgatgaaagac
caggtcgatcagctgctggctaacggcgtagcggcggcctgcctcaactcgacccaaagc
cgtgagcagcagcaggaagtgatggctggctgccgtaccgggcaaattcgcctgctgtat
atcgcgcccgaacgcctgatgatggacaactttattgaccatctcagcaactggcagctt
tcgatggtggcggtggacgaagcgcactgtatttcccagtgggggcacgacttccgccct
gagtatgccgcgcttggtcagcttcgcgagcgcctcccggccgtgccctttgtcgcatta
accgcgacggcggacgatactacccggctggatattgtgcgcctgctcggccttaacgat
ccgctcatccaaatcagcagctttgaccggcccaatatccgctacatgctgatggagaaa
ttcaaacctctcgatcagctgactcgctatattcaggagcagcgcggcaaatccggcatt
atttactgcaacagccgtgccaaagtggaagacattgccgcccgtctgcaaagcaagggc
gtgagcgccggagcctaccatgccgggctggagcaccaggtccgcggcgaagtgcaggaa
aagtttcagcgtgacgatctgcaaatcgtggtggctaccgtcgcgtttggtatgggcatc
aacaagccgaacgtgcgctttgttgcccactttgatattccgcgcaacatcgaatcctat
taccaggaaacagggcgcgccgggcgagatggtcttcctgcggaagcgatgctgttttac
gatcctgccgatatggcctggctgcgtaagtgcctggaggagaaagcccccggggcgctc
caggacattgagcgccacaagctcaacgcgatgggcgcttttgccgaagcgcaaacctgc
cgccgtctggtgctgctcaactatttcggcgaaggccgccagcaggcctgcggcaactgc
gatatctgccttgacccgccgcgtcgctacgacgggctgatggatgcccagaaagcgctg
tcctgcatttaccgggtcggccagcggtttggtatgggctatgtggttgaagtgcttcgc
ggctccaataaccagcgtattcgcgacctcggccacgacaagctgaaagtttatggcgaa
ggccgcgaccacacgacggagcactgggtgagcgttattcgccagctgatccaccttggc
gttgtcacgcagaacatcgccgcgcactcggcattacagctgacggaggccgcccgccct
tatctgcgtggcgaagagccgctgatgctggcggtgccgcgcgttgtggtgctcaagccg
cgcgccagccagaaagtgtttggcggcaactacgaccgcaaactgtttgccaagctgcgc
aaactgcgaaaatctattgccgacgaagaaaatatcccgccatacgtggtgttcaacgat
gcaacgcttatcgaaatggcggagcaaatgccgctctctccgggtgaaatgctggggatt
aacggcgtgggcacccgcaaacttgagcgctttggtcgcccgtttatgacgatgatccgc
gaccatgttgacggggttgatgaagagtag
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