Cedecea davisae: ACG1VR_22210
Help
Entry
ACG1VR_22210 CDS
T11677
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdav Cedecea davisae
Pathway
cdav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACG1VR_22210 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdav03021
]
ACG1VR_22210 (rho)
03019 Messenger RNA biogenesis [BR:
cdav03019
]
ACG1VR_22210 (rho)
Transcription machinery [BR:
cdav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACG1VR_22210 (rho)
Messenger RNA biogenesis [BR:
cdav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACG1VR_22210 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XJO94461
LinkDB
All DBs
Position
complement(4639701..4640960)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaaccaagcccgcatgcgcaagcaggacatcattttctccatcctgaag
caacacgctaagagtggcgaagatatctttggtgatggcgtgctggagatactgcaggat
ggatttggtttcctccgctccgcagacagctcctaccttgccggtcccgatgacatctac
gtttctcccagccaaatccgccgtttcaacctccgcacaggggataccatctccggtaag
attcgtccgccgaaagaaggcgaacgttactttgcgctgttgaaagttaacgaagttaac
tacgataagccggaaaacgcccgtagcaagatcctgtttgaaaacttaaccccgctgcat
gccaattctcgtctgcgcatggaacgtggtaacggttcaaccgaagacttgactgctcgc
gtactggacctggcatcgcctatcggtcgtggccagcgcggcctgatcgttgcaccgcca
aaagccggtaaaactatgctgctgcaaaacatcgctcagagcattgcttacaaccatccg
gactgtgtgctgatggttctgctgatcgatgaacgtccggaagaagtgaccgagatgcag
cgtctggtaaaaggtgaagttgttgcttccacctttgacgaaccggcttcccgccacgtt
caggtagccgaaatggttatcgagaaggcgaagcgtctggttgagcataagaaagacgtt
attatcctgctggactccatcacccgtctggctcgtgcgtacaacaccgtggttccggcc
tcaggcaaagtgctgaccggtggtgtggacgctaacgccctgcaccgtccaaaacgcttc
ttcggcgccgcgcgtaacgtggaagagggcggcagcctgaccatcatcgcgaccgcgctt
atcgataccggctctaaaatggatgaagttatctacgaagagtttaaaggtaccggtaac
atggaactgcatctctcccgtaagatcgcagaaaaacgcgtcttcccggctatcgattac
aaccgttccggtacccgtaaagaagagctgctgacgactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccaccctatgggtgagatcgatgcaatggagttcctcatc
aataagttggcgatgactaaaaccaacgacgacttctttgatatgatgaagcgctcttaa
DBGET
integrated database retrieval system
