Corynebacterium diphtheriae BH8: CDBH8_0005
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Entry
CDBH8_0005 CDS
T01698
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cdb
Corynebacterium diphtheriae BH8
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdb03032
]
CDBH8_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
cdb03400
]
CDBH8_0005 (gyrB)
Enzymes [BR:
cdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CDBH8_0005 (gyrB)
DNA replication proteins [BR:
cdb03032
]
Prokaryotic type
DNA Topoisomerases
CDBH8_0005 (gyrB)
DNA repair and recombination proteins [BR:
cdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDBH8_0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AEX47532
LinkDB
All DBs
Position
5376..7421
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AA seq
681 aa
AA seq
DB search
MATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAGYATH
VDVTLLADGGVEVVDNGRGIPVEMHPSGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKRDGKHWLQNFSMAIPDPLVEGGNARGTGTTIRFWPDAEIFETTT
FKFETISRRLQEMAFLNKGLTITLVDKRVTDEELELEAIAEEGDTAENVSLDQIDVDADG
NIDAPAAPKKREKKKVFFYPDGLKDYVAHLNKSKQVIHPTIISFDAKGNDHEVEVAMQWN
NSYSQSVHTFANTINTFEGGTHEEGFRAALTSLMNRYAREHKLLKEKEANLTGDDCREGL
SAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVNEHIADWLDANPAEAKTIINKAVSSA
HARVAARKARDLVRRKSATDLGGLPGKLADCRSKDPEKSELYIVEGDSAGGSAKAGRDSL
YQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDIKKLRYHKIVLMADAD
VDGSHIATLLLTLLFRFMPQLIEEGHVYLAQPPLYKLKWGKGEPGFAYSDAERDTLLAEG
LAQNRKINKDDGIQRYKGLGEMNASELWETTLDPKYRVLRRVDITDAQRADEIFSILMGD
DVAARRSFITRRAKDVRFLDI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccgctgaacatgaatatggcgcctcatccattacgatcctcgagggtctggag
gccgtccgcaagcgtcccggtatgtacatcggttctaccggtgaacgcggcctgcaccac
ctagtgtgggaggtcgtggataactccgtcgacgaggcaatggccggttatgctacccac
gtcgatgtgaccctgcttgccgacggcggcgtggaggtcgtggataacggccgtggtatc
cccgttgaaatgcacccatctggtgcgccgaccgtccaagtcgttatgacccagctgcac
gcaggtggcaagttcgactccgattcctacgcggtttccggtggtctacacggtgtgggt
atctccgtcgtgaacgccctgtctacccgtgtggaggcagacatcaaacgtgatggcaag
cactggctgcagaacttctccatggccatccctgatccgctggtcgagggcggtaatgct
cgtggcaccggtaccaccatccgcttctggccagatgcggagatctttgaaacgaccacc
ttcaagtttgagacgatcagccgacgtctccaagaaatggccttcttgaacaagggtctg
accattacgctggtagacaagcgcgttactgacgaggaacttgaactcgaagcgatcgcc
gaagaaggcgacaccgctgaaaacgtttctttggaccaaatcgatgtcgatgccgacggc
aacatcgatgcacctgctgcaccaaagaaacgcgagaagaagaaggttttcttctaccca
gatggtttgaaggactacgttgcacacctgaacaagtccaagcaggttatccaccccacc
atcatctccttcgacgccaagggcaacgaccacgaggttgaggtggcaatgcagtggaac
aacagctactcgcagagcgtgcacaccttcgctaacaccattaacacgtttgaaggtggc
acccacgaagagggcttccgtgccgcgctgacgtcattgatgaaccgctacgcccgtgag
cacaagctgctcaaggaaaaggaagcaaaccttacgggtgacgactgccgtgagggcctt
tccgccgtgatctccgtgcgcgttggggatccgcagttcgagggccagaccaagactaaa
cttggaaacactgaggtcaagggctttgttcaacgtatggtcaatgagcacattgctgat
tggctggatgctaaccctgcagaagccaagacgatcatcaacaaagctgtgtcctcggcc
catgctcgcgtggcggctcgtaaggcgcgcgatttggtgcgtcgtaagtcggccaccgac
ctcggcggcctgcccggtaagctcgctgattgccgctccaaggacccagaaaagtccgaa
ctgtatatcgtggagggtgactccgcaggtggttccgctaaggctggccgtgattccctc
taccaggcaattcttccgctgcgcggtaagatcctgaacgtggaaaaggcacgtttggac
aaggtgcttaagaacgccgaggtccaagcgatcatcaccgctttgggtaccggcattcat
gatgagtttgacattaagaagctgcgctaccacaagatcgtgctgatggccgacgccgat
gtcgacggctctcacatcgcaaccttgctgctcaccttgctgttccgtttcatgccacag
ctgatcgaagaaggccacgtctacctcgcgcagccaccgctctacaaacttaagtggggc
aagggtgagccaggatttgcctattccgatgcggaacgcgacaccttgcttgctgagggc
ttggctcaaaaccgcaagatcaacaaggacgacggcatccagcgttacaaaggtctaggc
gagatgaacgcctctgagctgtgggaaaccacacttgatccgaagtaccgcgtcctgcgt
cgcgtggacattaccgacgcacagcgtgccgacgagatcttctccatcctcatgggtgac
gacgtagctgcacgccgtagctttattacccgccgtgctaaggacgtccgtttcttggac
atctag
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