Corynebacterium diphtheriae BH8: CDBH8_0304
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Entry
CDBH8_0304 CDS
T01698
Symbol
rmlB
Name
(GenBank) dTDP-glucose or rhamnose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cdb
Corynebacterium diphtheriae BH8
Pathway
cdb00521
Streptomycin biosynthesis
cdb00523
Polyketide sugar unit biosynthesis
cdb00525
Acarbose and validamycin biosynthesis
cdb00541
Biosynthesis of various nucleotide sugars
cdb01100
Metabolic pathways
cdb01110
Biosynthesis of secondary metabolites
cdb01250
Biosynthesis of nucleotide sugars
Module
cdb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDBH8_0304 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDBH8_0304 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
CDBH8_0304 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDBH8_0304 (rmlB)
00525 Acarbose and validamycin biosynthesis
CDBH8_0304 (rmlB)
Enzymes [BR:
cdb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CDBH8_0304 (rmlB)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AEX47829
LinkDB
All DBs
Position
complement(299277..300269)
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AA seq
330 aa
AA seq
DB search
MLVTGGAGFIGSNFVRRVLATRPEYRVTVLDKLTYAGNAANLDGCDATLVVGDICDAALV
DRLAADSDVVVHFAAESHNDNSLVDPSPFVQTNVVGTFTLLEAARRHDVRFHHVSTDEVF
GDLELDDPNRFTEHTPYNPSSPYSATKAGSDHLVRAWVRSFGLRATISHCSNNYGPYQHI
EKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHNDAVIRILESGRIGQTYIIGADNDH
VNNKTVITLICELMGADGFEHVADRPGHDMRYAMDSSTLRAELGWQPRFTDTDTGMREGL
LQTIEWYRTHRDWWEPQKAAVEQRYLAQGH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaccggcggcgccggttttattggttcgaattttgtcaggcgtgttcttgct
acccgtccggagtatcgggtcacggtactagataagctgacgtatgccggcaacgccgca
aatttggatggctgcgatgccactttggttgtaggcgatatttgtgatgcagcgttggtg
gatcgtttggcggctgattcggatgtggtggtgcattttgccgcggagtcgcataacgat
aattctttggtggatccttcgccgtttgttcagaccaatgtggtaggtacgtttacgttg
ttggaggctgcgcgtcgccacgatgtgcgcttccatcatgtgtctacggatgaggttttt
ggtgatcttgagttagatgatccgaaccggtttactgagcacacgccgtataatccgtcg
tcaccatattcggcaacgaaggctgggtcggatcatctggtacgcgcgtgggttcgttca
tttggattgcgtgcaacgatttctcattgttccaataattatgggccttaccagcacatt
gagaagtttattccacgccagatcaccaacattttaagtgggctcacgcctaagttgtac
ggtacgggcgagcaggtacgcgactggatccatgtggatgaccacaatgatgccgtgatc
cggattcttgaaagtggccgtatcgggcaaacctacatcattggtgcagacaacgatcat
gtgaacaacaaaacggtaataacactgatttgtgagctcatgggtgcggacggttttgag
cacgttgcagaccgccctggccacgacatgcgctatgccatggactcctccaccttgcgc
gcagagctcggctggcagccacgttttaccgataccgacaccggtatgcgcgagggcttg
ctacaaaccatcgagtggtatcgcacgcatcgcgattggtgggagccccaaaaggccgcg
gtagagcagcgttatctagcccaagggcattaa
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