Corynebacterium diphtheriae BH8: CDBH8_1128
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Entry
CDBH8_1128 CDS
T01698
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdb
Corynebacterium diphtheriae BH8
Pathway
cdb03030
DNA replication
cdb03410
Base excision repair
cdb03420
Nucleotide excision repair
cdb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDBH8_1128
03410 Base excision repair
CDBH8_1128
03420 Nucleotide excision repair
CDBH8_1128
03440 Homologous recombination
CDBH8_1128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdb03032
]
CDBH8_1128
03400 DNA repair and recombination proteins [BR:
cdb03400
]
CDBH8_1128
Enzymes [BR:
cdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDBH8_1128
DNA replication proteins [BR:
cdb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDBH8_1128
DNA repair and recombination proteins [BR:
cdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDBH8_1128
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDBH8_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
DUF4880
Motif
Other DBs
NCBI-ProteinID:
AEX48651
LinkDB
All DBs
Position
1132132..1134777
Genome browser
AA seq
881 aa
AA seq
DB search
MLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSLLVEEKPTHVAVAFDVGRQ
TFRTEMFPEYKAQREAAPPEFKGQVEIIKEVLETLGITTLEKENFEADDIIATLATAAGP
LGFDTYIVTGDRDSFQLVNESTTVLYPMRGVSVLHRFTPEAVEEKYGLTPVQYPDFAALR
GDPSDNLPNIPGVGEKTATKWIVQYGNLDSLLAHADEIKGKAGNSFRERLDQVRMNRTLT
EMVKDLELPYAPDQLERKPADASAIASKFDELEFGSNLRDRVIHAVDAQGNVSEESEEDK
PEVVIDHEKLASWLATRAGQSLALYVRGHGSPASGDAESAAIVDKQFHAVALDFGDLDAD
DDQAFAQWIASDSPKYLHEAKAVFHMLAGRGYTLNGIEHDTAIAGYLLRPGQRTYDLKDV
YQRHLQRQLGGGSSESGQLSLLDAPDAQELVDSAVAILELSKSLTAQLQAIDAYELYREM
ELPLVGVLARMEATGICVDVATLREQRDIFVEQVKEEESAARELAGDETLNLSSPKQLQV
VLFDTLGLPKTKKTKTGYSTAAKEIESLAVKNPHPFLDHLLAHREFQKMKTTLDGLIKAV
GDDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRSAFVVGQGYKSLLTADYSQ
IEMRVMAHLSEDPGLIEAYQTGEDLHNFVGSKVFDVPVDQVTPELRRRVKAMSYGLVYGL
SAFGLSQQLNIPAGEAKVIMESYFERFGGVKRYLDQVVEQARKDGFTSTLFGRRRYLPEL
SSDNRVARENAERAALNAPIQGTAADIIKIAMLRVDARLTAENCQSRVLLQVHDELVLEV
ASGEQEKVQQLVEEEMDAAISLRVPLEVSAGVGTNWEEAAH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgacggccactcgatggccttccgtgcgttctacgcgctgcctgcggagaac
ttctctacatcgggtggacaggcgacgaatgccgtttacggatttttgtcgatgttgtcg
tctctgctcgttgaagaaaagccaacccacgtagcagttgcgttcgatgttggccgccaa
acatttcgaaccgagatgttccctgaatacaaagcgcagcgtgaggctgcgccaccagaa
ttcaagggacaggtggaaattattaaagaggtcctagagactttgggaatcaccaccttg
gaaaaagaaaattttgaggcggacgatatcatcgccacgttggctaccgcagcgggccca
cttggttttgatacgtatatcgttactggtgatcgcgattctttccagctagtaaacgaa
tcaaccacggtgctgtatcccatgcgtggtgtatctgttcttcatcgtttcaccccagaa
gcggtggaagaaaaatatggattaactccagtacagtatccagatttcgcggcattgcgg
ggagatccttcagataatttgcctaatatcccaggtgttggtgagaaaaccgctacaaag
tggatcgtccaatatggaaatctggattccttgcttgctcatgccgatgagattaagggc
aaagctggtaatagcttccgagagcgtttagatcaggtgcgtatgaatcgcactttgact
gagatggtcaaggatctcgaacttccttatgctccagatcagctcgagcgcaaacctgct
gatgcctcggcaattgcatctaagtttgatgaacttgaatttggatcgaatctccgtgat
cgagtaatccatgcagttgatgcgcaagggaacgtctctgaagagtctgaagaagacaag
cctgaagtcgtcatcgaccatgaaaaactagcatcatggcttgccactcgtgctgggcag
tcgctggcattgtatgtgcgaggccatggtagtcccgccagtggtgatgctgagtcggca
gcgatcgtcgataagcaatttcatgctgtagcgcttgatttcggtgaccttgacgccgat
gacgaccaagcatttgcgcagtggattgctagtgattcgcctaaatacctacatgaagct
aaagctgtatttcatatgctcgcaggcaggggctacactctcaacggcatcgagcatgat
accgcaattgcggggtacttattgcgccctggccagcgcacgtatgatctgaaagacgtg
tatcagcgccatttgcaacgtcaactaggcggcggttctagcgagagcggtcaactatcg
ttgcttgacgcacctgatgctcaagaacttgttgacagtgctgtagcgattttggagtta
agtaaatcgcttactgcgcaactacaagctatcgacgcatatgagctctatcgggaaatg
gagcttccgctcgttggcgtgttggcgcgcatggaggcaactggaatttgcgttgatgtg
gccacattgcgggaacagcgagacatatttgttgagcaggttaaagaagaagaaagcgct
gcccgggaactcgcgggggacgagactctaaatctgtcgagcccaaagcagcttcaagta
gttttatttgacacattagggcttcctaagactaagaagaccaagactggatactccacg
gcagcaaaagaaatagaatcgctggctgttaaaaatccacatccgttccttgatcatctc
ttggcgcatcgagagttccaaaagatgaaaaccactctagacggcctcattaaagcagtc
ggagatgacggtcgtattcacactacgtttaatcaaactgtcgcctcaactggtcgtttg
agttcaacggaaccaaacctgcaaaacattcctgtgcgtactccagcaggaaggaaaatt
cgctctgcttttgtggtaggacaagggtataagtctctgctgacggcagactattcgcag
attgagatgcgtgtgatggcgcatctttctgaggatccaggtttgattgaggcttatcaa
acgggtgaggacctccacaattttgtgggttcgaaggtcttcgatgtgccagttgatcaa
gtaactcctgaactacgtcgccgagttaaagcgatgagctatgggttggtctatgggctt
tctgcatttggtctttcccaacaattaaacatccctgctggtgaagccaaagtgatcatg
gaaagctacttcgaacgattcggaggggtaaaacgatatcttgaccaagtggtcgaacaa
gcccgaaaggatgggttcacatcgactttgtttggccgtcgacgttacttgccggagctt
tcttcggataatcgagtggcacgtgaaaatgccgaacgagctgcattgaatgctccaatt
caaggcacagcagcagacattattaagattgcaatgctgcgtgtcgacgcccgccttact
gcagaaaactgccaatcgagggtgcttcttcaagtccacgacgaattggtgctcgaggta
gcttcaggtgaacaagaaaaggttcaacaacttgtagaagaagaaatggacgccgctatt
tcactgcgcgtaccgctggaggtttctgcaggtgtcggtacaaactgggaagaagctgcg
cattaa
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