Corynebacterium diphtheriae BH8: CDBH8_2290
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Entry
CDBH8_2290 CDS
T01698
Name
(GenBank) putative DNA repair glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cdb
Corynebacterium diphtheriae BH8
Pathway
cdb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDBH8_2290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdb03400
]
CDBH8_2290
Enzymes [BR:
cdb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDBH8_2290
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDBH8_2290
DNA repair and recombination proteins [BR:
cdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDBH8_2290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AEX49803
LinkDB
All DBs
Position
2387801..2388394
Genome browser
AA seq
197 aa
AA seq
DB search
MPEGHVIHRLADQLNQHFASTQATPDTQPRRPLLVTSPQGRFATEAAQLNGHALDHAEAW
GKHLFLCFDSDNPAHIVHIHLGLIGSMRLEDPADVWGQIRFRIEDPKQPTTSAVAANLRG
PQWCRLITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNI
YRAETLFRRLCCKNREA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtcacgtcatccatcgcctcgcagaccaactcaaccagcatttcgccagc
acacaggcaacaccggacacacaaccccgccgcccgctactggtcacctccccacaaggt
cgctttgctacagaggccgcccaactcaacggtcatgcactcgaccacgccgaggcatgg
ggcaaacaccttttcctctgctttgatagcgataacccagcccacatcgtccacatccac
ctcgggcttatcggaagcatgcgcttagaagacccagccgatgtgtggggtcagattcga
ttccggatcgaagacccaaaacaacccaccaccagcgcggtagcagcaaacctgcgcggc
cctcagtggtgcaggttgattacggaggcagaaatgaccaccgccaccgcaaagctcggc
gccgatccgctacgcgacgacgccaacttcctagcaatcaaaacaaaagtggcgcgctcg
cgtcgcagtatcggttccctgctgatggaccagaaactctttgccggcgtaggcaatatc
taccgtgccgaaacactcttccgccggctctgttgcaaaaatcgtgaagcttga
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