Clostridioides difficile CD196: CD196_0006
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Entry
CD196_0006 CDS
T00997
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdc03032
]
CD196_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0006 (gyrA)
Enzymes [BR:
cdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CD196_0006 (gyrA)
DNA replication proteins [BR:
cdc03032
]
Prokaryotic type
DNA Topoisomerases
CD196_0006 (gyrA)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CD196_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
CBA60051
UniProt:
A0A0H3N2J0
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All DBs
Position
6066..8492
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AA seq
808 aa
AA seq
DB search
MEENNKILPIEIAEEMKKSYIDYSMSVIAGRALPDVRDGLKPVHRRILYSMSELNLTPDK
PYRKSARIVGDVLGKYHPHGDTAVYYAMVRMAQDFSTRALLVDGHGNFGSVDGDSPAAMR
YTEAKMSKLSLELLRDIEKETVDFKPNFDESLKEPSVLPARYPNLLVNGSNGIAVGMATS
IPPHNLAEVIDATVYLIDNPECSVDDLIKFVQGPDFPTAAIIMGKESIAEAYRTGRGKVK
VRSRAFIEELPKGKQQIIVTEIPYQVNKAKLVERIAELVKEKRIEGISDLRDESNRNGMR
IVIELKRDANANIVLNNLYKHSQMEDTFSIIMLALVDGQPRVLNLKQILYHYIKHQEDVV
TRRTKFELNKAEARAHILEGLKIALDNIDAVISLIRASKTGQEAKIGLIEKFKLTEIQAQ
AILDMRLQRLTGLERDKIEAEYEDLIKKINRLKEILADERLLLNVIKNEITIIKENYSDE
RRTEIRHAEGEIDMRDLISDEEIAITLTHFGYIKRLPSDTYKSQKRGGRGISALTTREED
FVRHLVTTTTHSRLLFFTNKGRVFKLNAYEIPEGKRQAKGTAIVNLLQLSADEKIATLIP
IDGNDENEYLLLATKKGIVKKTKREEFKNINKSGLIAIGLRDDDELIGVELTDGKQEVLL
VTKEGMSIRFDENDIRYMGRTAMGVKGITLSKEDFVVSMNLCSKGTDVLVVSKNGFGKRT
NIEEYRSQIRAGKGIKTYNISEKTGTIVGADMVNEDDEIMIINSDGVLIRIRVNEISLFG
RVTSGVKLMKTNDEVNVVSIAKINIEEE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaataacaaaatactccctattgaaatagcggaagaaatgaaaaaatcgtat
attgattattcaatgagtgttatagctggacgtgctcttcctgatgttagagatggttta
aagccagttcatagaagaatattatattcaatgagtgagttaaatttaactccagataaa
ccatacaggaagtcagctcgtattgttggggacgttttaggtaagtaccatcctcatgga
gatactgctgtttattatgctatggtaagaatggcacaagatttttcaactagagcactt
ttagtagatggtcatggtaactttggttctgttgatggggattcaccagctgctatgcgt
tatacagaagctaaaatgagtaaattatcattagaactactgagagatattgaaaaggaa
actgtagactttaaaccaaactttgatgagtcgttaaaagagccttcagtattgccagct
agatatcctaatttattagtaaatggctcaaatggtatagctgttggtatggcaacttca
atacctccacataatttagcagaagtaattgatgcaactgtatatttgatagataatcca
gagtgtagtgtagatgatttaataaaatttgttcaaggaccagatttccctacagctgca
attataatgggaaaagaaagtatagcagaagcatacagaactggaagaggaaaagttaaa
gttaggtctagagcttttatagaagaactaccaaaaggaaaacagcaaataatagttaca
gaaataccttatcaagtaaataaggctaaactggttgaaagaatagcagagttagttaaa
gaaaagagaatagaaggtatatcagacctaagagacgaaagtaatagaaatggtatgaga
attgttatagaattaaagagggatgctaatgctaatatagtattaaataatttgtataaa
cattctcaaatggaagatacttttagtataataatgcttgcacttgtagatggtcagcca
agagttttaaatcttaaacaaatattatatcattatattaaacatcaagaagatgttgtt
acaagaagaactaaatttgaactaaataaagctgaagcaagagcacatattttagaagga
ttaaagattgctttagataatatagatgctgttataagcttgataagagcttcaaagact
gggcaagaagctaagataggtttaatagaaaaattcaaattaactgaaatccaagcacaa
gctatattagatatgagacttcaaagacttacaggtttagaaagagataagatagaagct
gaatatgaagatttaatcaagaagataaatagattaaaagaaattttagctgatgaaaga
ttacttttaaatgtaataaagaatgaaattacaataataaaagaaaattactctgatgag
agaagaacagaaataagacatgctgaaggcgaaatagatatgagagatcttataagtgat
gaagaaatagcaataactcttactcactttggatatataaaaaggcttccatctgatact
tataagagtcaaaaaaggggtggaagaggtatttcagcacttacaactagagaagaagat
tttgtaaggcacttggtaactacaactactcatagtagactattattctttacaaataaa
ggtagagtatttaaattaaatgcatatgaaataccagaaggtaagagacaggctaaaggt
actgctatagtgaatttacttcaattgtcagcagatgagaaaattgctactctaatacct
attgatggtaatgatgaaaatgaatatttattacttgcaacgaaaaaaggtattgttaaa
aagactaagagagaagagttcaaaaatataaataaatctggtcttattgctataggttta
agagatgatgatgagcttattggagtagaacttacagatggaaaacaagaagtactttta
gtaactaaagaaggtatgtctataagatttgatgaaaatgatataagatatatgggtaga
acagcaatgggtgtaaaaggtataactttaagtaaagaagattttgttgtgtctatgaac
ctttgcagtaaaggtacagatgtgttagttgtaagtaagaatggttttggaaagagaaca
aatatagaagagtatagaagtcaaataagagctggtaaaggaattaaaacttataatata
tctgaaaaaactggtacaattgtaggtgcagatatggtcaacgaagatgatgagataatg
attataaattctgatggagttcttattagaataagagtcaatgaaatatcactgtttgga
agagttacaagtggtgttaaattaatgaagacgaatgatgaagtcaatgtagtttcgatt
gccaaaataaatattgaagaagaatag
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