Clostridioides difficile CD196: CD196_0018
Help
Entry
CD196_0018 CDS
T00997
Symbol
recD
Name
(GenBank) recombination protein
KO
K06187
recombination protein RecR
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD196_0018 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0018 (recD)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CD196_0018 (recD)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CD196_0018 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
IMS_HHH
HHH_8
IMS_HHH_1
Motif
Other DBs
NCBI-ProteinID:
CBA60073
UniProt:
A0A0H3N782
LinkDB
All DBs
Position
22387..22986
Genome browser
AA seq
199 aa
AA seq
DB search
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSI
CCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGP
DMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGD
LEYADEVTISKALEGRREI
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttatacaggtcccataacgagacttatagaggaattttcaaagcttcctgga
gtaggaagaaagactgctcaaagattggcttttcatattattaatatgaatactaatgat
gtggaagctttatctaaagcgattatagatgcaaaaagagaaataagatattgctcaatt
tgttgtaatataacagatacagacccatgtagcatgtgttcaaataaaagtagagattca
agtgttatatgtgttgtggaagatccaagagatgtagcagctatggagagaacgagagag
tttaaaggacagtatcatgtattaaatggagtaatttctccaatggatggaattggacca
gatatgttaaaaataaaggaacttatccaaagacttggcaatcaggaagtcaaagaaata
ataatggcaacaaatcctactattgaaggtgaagcgacagccatgtatattgctaggtta
gtaaaaccaatgggaatcaaagtcactcggatagctcatggtcttcctgttggaggcgat
ttagagtatgcagatgaggtcacaatatcaaaagcactagaaggcagaagagaaatataa
DBGET
integrated database retrieval system