Clostridioides difficile CD196: CD196_0028
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Entry
CD196_0028 CDS
T00997
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0028 (radA)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CD196_0028 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
RecA
DnaB_C
NTPase_1
AAA_16
DUF7125
AAA_14
ATPase_2
nSTAND3
Rad51
AAA_22
SLFN-g3_helicase
DUF7129
AAA_24
ABC_tran
AAA_30
AAA
NPHP3_N
NACHT
ABC_ATPase
zf-RING_10
HypA
Motif
Other DBs
NCBI-ProteinID:
CBA60090
UniProt:
A0A0H3MY09
LinkDB
All DBs
Position
45424..46797
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AA seq
457 aa
AA seq
DB search
MAKIKTKYVCQSCGYETAKWLGKCPECTKWNTFVEEIDQKSTKKEVFIIDKSSSKPVSIN
SIESKEEERFTTDINELDRVLGGGIVKGSLVLVGGDPGIGKSTLLIQVSSNVANLGKTVL
YITGEESESQIKMRAKRLGINSENLYIFAENNLSIIESYLESVNPELIILDSIQTVFSPE
ISSAPGTVSQIKEGTSKFMKISKKMGISTFIVGHVTKEGSLAGPKLLEHMVDTVLYFEGE
RYNTYRLVRAVKNRFGSTNELGVFEMRDLGLVELDNPSKILISEKPKDVAGSVIISTVEG
TRPMLLELQALVSPTSFGIPKRTSTGVDYNRVGMLLAVLEKRVGLQIQNQDVYINIVGGI
KINEPSIDLGIAISVASSFRNIPIDENIAVTGEVGLTGEVRAVSFIEKRIAECKKLGFKK
IVVPRSNYDVVKETKGIEIWPVDNLRQAINIVLGRNQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaataaaaacaaaatatgtatgtcaatcttgtggatatgaaacagctaaatgg
cttggtaaatgtccagaatgtacaaaatggaatacatttgtagaagaaatagaccaaaaa
agcaccaaaaaagaggtctttataatagataaatcttcatctaaaccagtcagtataaac
tcaatagaaagtaaagaagaagagaggtttacaacagatataaatgaattagatagagtg
cttggaggaggtatagttaaaggctctttagtgcttgttggtggtgaccctggtataggt
aaatcaacacttttaatccaagtatctagtaatgttgccaatttaggaaaaactgtttta
tatataactggagaagaatcagaatctcaaataaaaatgagagctaaaagattaggtatt
aactcagaaaatttatatatatttgctgaaaataatttaagtataattgaatcttattta
gaaagtgtaaatccagaattaataattctagactcaattcaaactgtcttcagtccagaa
atatcctcggcaccaggaactgtcagccaaattaaagaaggtacttcaaaattcatgaaa
atttctaaaaaaatgggaatttcaacgttcatagttgggcatgttacaaaagaaggttca
ctagcaggaccaaaattattagagcatatggttgatactgttctatattttgaaggagaa
agatataatacttatagattagtaagagctgttaaaaatcgatttggttcaactaatgaa
cttggagtatttgaaatgagggatttaggattagtagaacttgataatccatctaaaatt
ttaatctctgaaaaaccaaaagatgtagcaggttcagtaataatatctactgtagaaggt
acgagaccaatgttacttgaattgcaagcattagtttctcctacaagttttggtatacca
aaaagaacatctacaggagtcgattacaatagagtaggtatgttattagcagtattagaa
aaacgtgttggtttgcaaatacaaaatcaagatgtctatataaacatagttggaggaata
aagataaatgaaccctcaattgatttagggatagccatttctgtagcatctagttttaga
aatataccgatagatgaaaatatagctgttacaggagaagtgggacttacaggagaagtt
agagcagtaagctttatagaaaagagaatagctgagtgtaaaaaacttggatttaaaaag
atagtagttcctagaagtaattatgatgttgtaaaagagaccaaaggcatagaaatatgg
ccagtagataacttaagacaagctataaatatagtacttgggaggaatcaataa
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