KEGG   Clostridioides difficile CD196: CD196_0107
Entry
CD196_0107        CDS       T00997                                 
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
  KO
K02986  small subunit ribosomal protein S4
Organism
cdc  Clostridioides difficile CD196
Pathway
cdc03010  Ribosome
Brite
KEGG Orthology (KO) [BR:cdc00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CD196_0107 (rpsD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cdc03011]
    CD196_0107 (rpsD)
Ribosome [BR:cdc03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    CD196_0107 (rpsD)
  Bacteria
    CD196_0107 (rpsD)
  Archaea
    CD196_0107 (rpsD)
SSDB
Motif
Pfam: Ribosomal_S4 S4 SYY_C-terminal RE_NgoPII MTRES1_C ApoA-II
Other DBs
NCBI-ProteinID: CBA60237
UniProt: A0A0H3N7I9
LinkDB
Position
120156..120779
AA seq 207 aa
MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKVSNYGLQLREK
QKVKRIYGVLETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQLV
THGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEGMT
AKVVGVPTREDIDLEIAEHLIIELYSK
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcaagatatacaggtgcatcatgtagacaatgccgtagagagggaatgaaattattc
cttaaaggtgatagatgttatacagacaaatgtgctatagtaaaaagaaactatgctcca
ggtcaacatggccaaggaagaaagaaagtttctaactatggattacaattaagagaaaaa
caaaaagttaaaagaatatatggagttttagagactcaatttagaaatttatatgaacgt
gctgaaaatatgcctggtaaagcaggtgagaacttattaagtttattagagagaagatta
gataatgtagtttacagaatgggactagcatcttctagaaaagaagctagacaattagtg
actcatggtcatttcactttaaatggaaataaagtagacataccttcattaatagttaag
gttggagatgttatagaagttaaagagaaatcaagatcttctgcaaaattcaaaaattta
gtagaagttaactcaagaatagctcctaagtggttagaagctaatgtagaaggaatgaca
gcaaaagtagttggtgttccaacaagagaagatatagatcttgagatagcagagcactta
atcatagaactttactctaaataa

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