Clostridioides difficile CD196: CD196_0136
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Entry
CD196_0136 CDS
T00997
Symbol
spoIIC
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
CD196_0136 (spoIIC)
Enzymes [BR:
cdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CD196_0136 (spoIIC)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CD196_0136 (spoIIC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
CBA60288
UniProt:
A0A0H3N2W5
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All DBs
Position
167630..168694
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AA seq
354 aa
AA seq
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MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEK
STVSYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAART
YVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKG
QIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANF
DIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacccattggttgttttgttaggatttgtgacttgctctgtgttagttccatca
cttataactttagtttcttataaaaatgtagaattaactgaaaaaccagagagcccagta
tctataaacaaaactattaaaaaaagtgatattgaagacaaaggtaataaagaagaaaaa
agtacagtgagctatgaaactgtaaataaaaaagcaccaattatcaatgtatataatcat
ataacagggaaaaccgaaaagatggacatggagaactatttatgtggagtactagctggt
gagatgtcttcagagtttgatatagaagctttaaaagctcaatctgtagcagctagaaca
tatgtagtatataaacaggaacatggtaaatctagtaaacataaaaatgcagtagtatgt
actgattataaacattgtcaagaatataagagttatgatactcttaaaaaattaaatggt
gaagaatggattaagaataaatattccaaaatccaagaagcagttagaggaactaaaggt
caaataataacttataatgataaggcgatacttcctctttatttttctacatcttcagga
aaaacagaaaatagtgaagaagtattttctgcaaaatatccttatttaaagtctgtggaa
agtccttatgataagtattcccctaaatttgcgtcaacacttaaaataagtaacacagat
tttgttaaaagtcttagaagggcatatagcactattgtgatagatgtgaataatttaagt
aaacaagtttcaataactaaaagaagtgatgccggaactgtagaaaaaataaaattagga
aataaagaattgactggaaaagacattagaactgtttttaaattgaactctgcaaacttt
gacataaaatttggagaaggatacatagatttcgtggtaaaaggatatggtcatggtgtt
ggtatgagccagtggggagcagaaggaatggcagaagagggctataaatattatgatata
ttatcacattactacacagatacaaaaataaaagatatatactaa
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