Clostridioides difficile CD196: CD196_0157
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Entry
CD196_0157 CDS
T00997
Name
(GenBank) putative RNA-binding protein
KO
K06959
protein Tex
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CD196_0157
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
HHH_7
YqgF
OB_PDCD11
S1_RRP5
HHH_6
YpjP
T2SSK
HTH_Mga
SNARE
Motif
Other DBs
NCBI-ProteinID:
CBA60328
LinkDB
All DBs
Position
191316..193466
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AA seq
716 aa
AA seq
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MNKLDINQILKKEFNLRDEQINNTLKLIDEGNTIPFIARYRKEMTGEMSDVTLREFYEKL
MYLRNLQSRKDDVVRLIDEQGKLTDEITQNIEKAKTLQEVEDIYAPYKQKKRTRATIAKE
KGLENLALSILENNLDNIEIEAKNYLDEEKEVLSIEDALKGARDIIAELVSDDAKIRKYI
RELALREGMIVSKSATDEKSVYDMYYDYNEAVKSMAPHRVLAINRGEKESFLKVKLEINN
DKVLNYIINEYVNDKNFKNKEEIVSSIEDSYKRLIFPSIEREIRNHLTEIAQERAISVFG
KNVKSLLLQPPVKDKVVMGFDPAFRTGCKIAVVDKNGKLLDYTTVYPTDPQNDVEGAKKV
LKGLIEKYDIDIISIGNGTASRESETFVSEMIKEIDSEVQYVIVSEAGASVYSASELANE
EHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKRLEEVLDGVVEDSV
NSVGVDLNTASYSLLEHVAGISKAIAKNIIAYREENGDFTSRAQLKKVKRLGPQAFTQCA
GFMRILEGKNPLDNTGVHPESYDICKKMIEIIGYSLDDVKNKNIGEIDEKIKEIGLRELS
EKLEVGQVTLKDIIAEIKKPGRDPREEGIKPILRTDVLKIEDIQEGMTLKGTIRNVVDFG
AFVDIGIKNDGLVHKSEMSNSFVKDPMSIVTVGDIVDVKVIGIDLNKKRVALSMKK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattggatataaatcaaatcttaaaaaaagagtttaatcttagagatgaacaa
ataaataatacattaaaacttattgatgaaggaaatacaataccatttatagctagatat
agaaaagaaatgactggcgaaatgagtgatgttacactaagagaattttatgaaaaatta
atgtatttgagaaatcttcaaagtagaaaagatgatgtagttagactaatagatgaacaa
gggaaattaacagatgaaataacacaaaatatagaaaaagcaaaaacattacaagaagta
gaagatatatatgctccatataaacaaaagaaaagaactagagcaacaatagcaaaagaa
aaaggattagaaaatttagcattgtcaatactagagaataatttagataatatagaaata
gaggcaaagaattatcttgatgaagagaaagaagttctttctattgaagatgctctaaaa
ggtgctagagatataattgcagaactagtctcagatgatgctaagattagaaagtatata
agagaattagctttaagagaaggtatgatagttagcaaaagtgctactgatgagaaatcg
gtttatgatatgtattatgattataacgaagcagtaaaaagtatggctccacatagagtt
ttggcaataaacagaggagaaaaagaaagcttcctaaaggttaagttagaaataaataat
gataaagttttaaattacataataaacgaatatgtaaatgataaaaatttcaaaaataaa
gaagaaatcgtaagttcaatagaagattcttataaaagattaattttcccatcaatagaa
agagaaataagaaatcatttaacagaaatagctcaagaaagagctataagtgtatttgga
aagaatgttaaaagtttattgcttcaaccaccagttaaagacaaagtagttatgggattt
gaccctgcatttagaactggatgtaaaatagctgtagtagataaaaatggtaaactacta
gattatacaacagtatatccaacagaccctcaaaatgatgtagagggagcaaagaaagtt
ttaaaaggattgattgaaaaatacgatatagatataatttcaattggaaatggtactgca
tctagagaatcagaaacttttgtatcagaaatgataaaagaaatagatagcgaagtgcag
tatgtgatagttagtgaagcaggagcatctgtttattcagcatctgaacttgcaaatgag
gaacatccagatataaatgtatcaataagaggagctatatctatagctagaagattacaa
gacccattagcagagcttgtaaaaatagaccctaaaagtattggtgttggtcaatatcag
catgatttaaacaaaaagagattagaagaagtgctagatggagttgttgaagattctgta
aatagtgttggagtagatttaaataccgcatcatactccctactagaacatgttgcagga
ataagtaaagctatagcaaaaaatataatagcatatagagaagaaaatggagattttaca
tcaagagcacaattgaaaaaagtaaaaagactaggacctcaagcatttactcaatgtgct
ggatttatgagaatcttagagggtaaaaatccactagataatacaggtgtgcatcctgaa
agttatgatatatgtaaaaaaatgattgagataattggatattctttagatgatgtaaag
aataagaatataggtgaaatagatgaaaaaataaaagaaattggcttgagggaattaagt
gaaaaactggaagtaggacaagttacgttaaaagatatcatagctgaaatcaaaaaacca
ggaagagacccaagagaagaaggtataaaacctatacttagaactgatgtcttaaaaatt
gaagatatacaagagggtatgactttaaaaggtacaataagaaatgttgtagactttggt
gcatttgtagatattggaataaaaaatgacggattagttcataaatcagaaatgagtaat
agttttgtgaaagaccctatgagtattgttacagtaggtgatatagtagatgtaaaagtc
attggaattgacttaaacaaaaaaagagttgccttatcaatgaaaaaatag
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