Clostridioides difficile CD196: CD196_0204
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Entry
CD196_0204 CDS
T00997
Name
(GenBank) putative DNA glycosylase (DNA repair protein)
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD196_0204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0204
Enzymes [BR:
cdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CD196_0204
DNA repair and recombination proteins [BR:
cdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD196_0204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CBA60418
UniProt:
A0A0H3N319
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All DBs
Position
247537..248412
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AA seq
291 aa
AA seq
DB search
MNVYEKGNGVILEGVTDFDPVHIFECGQCFRWHKQEDGSYTGVARGRILNVKKENDKIYL
NNTNLKEFNSIWYNYFDLGTDYTEIKNKLKNMDEYLNKATEFGWGIRILRQDGWEMLISF
IISSNNRIPMIQRAIENLSRKFGKYIGEYEGNEYYAFPTPEELNKASQEEIRACQTGFRD
KYIKSTTQAVIENNDEVSEYTNLSTEDCRKELLKFNGVGPKVCDCIALFGMQKYDSFPVD
VWVKRVMQEFYIDEDMSLPKMRTYGIDKFKEMSGFAQQYLFYYARELGIGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttatgaaaaaggtaatggagttatactagaaggagtaacagattttgaccca
gtacatatatttgagtgtggtcaatgttttagatggcacaaacaagaagatggctcatac
actggagttgcaagggggagaatattaaatgtcaaaaaagagaatgataaaatatattta
aataatacgaatttaaaggagtttaacagcatttggtataattactttgatttaggaact
gattatacagaaataaagaataagctaaaaaatatggatgaatatttgaataaggctact
gaatttggatggggaataagaatattaagacaagatggatgggaaatgcttatatcattt
ataatttcctctaataatagaattcctatgatacaaagagcgatagaaaatttatcaaga
aagtttggtaagtatataggtgaatatgaaggtaatgaatactatgcattcccaacacca
gaagaactaaataaggcctcacaagaggaaataagagcatgtcaaacaggttttagagat
aagtacataaaaagtactacacaggcagttatagagaataatgatgaggtatctgaatat
acaaatttaagtacagaggattgtagaaaagagcttttaaaatttaatggagtaggacca
aaagtatgtgattgtattgcattatttggtatgcaaaaatatgattcttttccagttgat
gtttgggttaagagagttatgcaagaattttatatagatgaagacatgagtttacctaaa
atgagaacttatggaatcgataaatttaaagaaatgtctggatttgctcaacagtactta
ttttactatgcaagagaactcggtataggaaaataa
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