Clostridioides difficile CD196: CD196_0546
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Entry
CD196_0546 CDS
T00997
Name
(GenBank) transposase-like protein b
KO
K07496
putative transposase
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CD196_0546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
zf-piccolo
zf_DPOE_2
Zn_ribbon_ZPR1
Motif
Other DBs
NCBI-ProteinID:
CBA61058
UniProt:
A0A0H3N8T5
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Position
647430..648539
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AA seq
369 aa
AA seq
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MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNL
KKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIVY
CGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIG
LDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKAARLQEH
IANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNRKLSRSISDVSWSEFIRQLEYKAN
WYGRQIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHDRDINASINILKEG
LRLITIQNK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagcttataagtttagaatgtatccaaataaaaaacagcaagagttaattaac
aaaacttttggatgttgtagatttgtatataataagtatcttgctaaaagaatagaagtt
tataaaaacgataaagaaacttttacttataaacagtgtagttctgatttgaccaattta
aaaaaagaattaaagtggcttaaagaacctgacaaattttcactacaaaacgccttaaaa
gatttagataatgcatataaaaaattctttaaagaaaaagcaggatttcctaaatttaaa
tcaaagaaaattaatagattttcatataaaactaactttacaaatggaaatatcgtgtat
tgtggtcaacatataaaactacctaaacttggtatggttaagataagggataaacaagta
cctcaaggtagaatacttaatgctactatatctaaagaaccaagtggtagatattatgta
tcattatgttgtactgatgtagatattgaagcatttgaaaatactaataatcagataggt
ttagatttaggaattaaagaattttgtatctcaagttgtggagaatttatagaaaatcct
aagtatcttaagaagtcattaaacaaacttgctaaattacaaagagaattatcgagaaag
acaatcggtagtttaaatagaaataaagcaagattaaaagctgcaagacttcaagaacat
atagctaatcaaagaaatgattttctacaaaaactatctactaaattaataaaagagaat
gatattatttgcatagaagatttacaagtaaagaatatgattaaaaatcgtaaactatct
cgctcaatttcagatgtatcatggtcagagtttattcgtcaattagaatacaaggctaat
tggtatggtagacaaattgtaaaggtaggtaaattctttgcaagttcacaaatatgcaat
aaatgtgggtataaaaacgaggaagtgaagaacttaaatataagagaatggatttgtcct
agttgtaatgaaactcacgatagagatataaatgcaagtataaatatattaaaagaagga
ttaagactaataacaattcaaaataaataa
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