Clostridioides difficile CD196: CD196_0608
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Entry
CD196_0608 CDS
T00997
Symbol
cdd4
Name
(GenBank) putative lantibiotic ABC transporter, ATP-binding protein
KO
K20459
lantibiotic transport system ATP-binding protein
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_0608 (cdd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_0608 (cdd4)
Transporters [BR:
cdc02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lantibiotic transporter
CD196_0608 (cdd4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
DrrA1-3_C
AAA_22
AAA_15
T2SSE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CBA61168
LinkDB
All DBs
Position
complement(731313..732236)
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AA seq
307 aa
AA seq
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MKHMEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPT
QGNINILGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEAL
KIVRLENQKNKKVNQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKS
LPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKAKNVVS
AQKLLNTKGYMSLIQNGYLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLEL
TGKAVTL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatggaaatgataattagaacacaaagactttcaaaggaatacaataaaata
tttagagtaaaggatatagacctaagagttccacaaggagctgtatatggttttttgggt
cctaatggagctggaaaatctaccactcttaaaatgcttcttggacttgctaaacccaca
caaggaaatattaatattttaggtaaagagttaaatgaaaaaaatagaatatcaatttta
aaagatataggttctttgatagaatctccatcatactatggtcatcttacagggcttgaa
aacatgaccataatgcaaagactcttagatttacctaaaaaaaatgtaaatgaagcatta
aaaattgtaaggttagaaaatcaaaaaaataaaaaagttaatcaatattctttaggtatg
aagcaacgtcttggcattgctatggcaataatgaagtttcccaaattattaatacttgat
gaacctacaaatggactcgacccagcagggattgaggaaattagagaattaataaaatct
ctaccagaaaaatacggcatgactgttctaatctctagccatcttttaagtgaaattgac
caaattgccacatcaataggaataataaatcatggcgaactggtttttcaagatagcata
aaagaacttcataatagaggtcaaagtcagattgctatcaaagctaagaatgttgtatct
gcacaaaagctattaaatactaaaggatatatgtcacttatacaaaatgggtacttgact
attgaaaatttaaaagactcagatgtggctaaaataaatggtatgcttgtccattcaaat
atagatgtatttagaatagaagaacataaaaaaagcttggaagatatattcctagaactt
actggtaaggcggtgactttataa
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