Clostridioides difficile CD196: CD196_0653
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Entry
CD196_0653 CDS
T00997
Name
(GenBank) putative DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CD196_0653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0653
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CD196_0653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
Flu_PB2_7th
ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
CBA61251
UniProt:
A0A0H3MZQ0
LinkDB
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Position
791089..793467
Genome browser
AA seq
792 aa
AA seq
DB search
MNEKSLRVLEYNKIIDLLKKKASSSLGLKYIENLVPNTDFVEVKSMLEETSEAQSIIIKR
GSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARRLRNSLSSSDEEDFNYPIIQ
SLSNSLYVYKDIEDQIYNAIISEVEISDNASSTLRDIRRRIAQKNQSIRSKLNSIISSTT
YQKYLQDAIISLRGDRFVVPVKSEYRSQVAGIVHDQSSSGATLFIEPMTIVEMNNELRQL
KLGEQEEIERILSEISAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEPTLNEDK
YLNIKNGRHPLLDKKKVVANTIYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLH
IPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAG
TDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYK
LLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEA
ERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRNLEQE
RASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKPGEEVKVITLNQNGS
VVSVDKKRKEAVVQIGIMKMTLPFKSLQKTRKDVSTNVTKSTRNIIRSKSGSVKNEVDLR
GLNLEEAIMEVEKYLDDAYVAGLESVTVIHGIGTGVLKAGLQDILRRNRHVKSQRGGQYG
EGGAGVTIVKLK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaatcgttaagagttctagaatacaataaaataatagatttgttaaagaag
aaagcctcatcttctttaggtctaaaatatatagaaaatttagtaccaaatactgatttt
gtagaagtgaaatctatgctagaagaaactagtgaagctcaatcaattattataaagaga
ggttcagtagggttggaaggtattcatgatatagaagataaggtaaagagagcttatata
ggtgcttctcttgacccaggaagtctgattatgatagcagataccttaagagtggctaga
agattaagaaatagcttatctagtagtgatgaagaagattttaattatccaataatacaa
tctctatcaaattctctatatgtgtacaaggacatagaagaccagatatacaatgctata
attagtgaagtagaaatatctgacaatgcttcaagtacacttagagatatcagaagaaga
atagcccaaaaaaatcaatccattaggtcaaaattaaattcaataataagttcaactact
tatcaaaagtacttacaagatgcaataatttctctaagaggtgatagatttgtagtacct
gtaaaatctgaatataggtcgcaagtagctggtatagtgcatgaccagtcatcttctggt
gcgacactttttatagagccaatgactatagtagagatgaacaatgaattgaggcagttg
aaactaggagagcaagaggaaatagaaagaattttatcagagatttcagctatggttgga
gaagtgagcgaagatttaatctctaatcaagagatacttggaagattggactttgcattt
tcaaagggaaaactttctatacagatgagaggaatagaaccaactttaaatgaggataaa
tatttaaacataaaaaatggaagacatccactgctggataaaaagaaggtagtagcaaat
acaatttatttaggaagagacttccatacattggtgataacaggtccaaacacaggtggt
aagactgttacaataaaaactgtaggtctatttgcacttatgacacaaagtggacttcat
atacctgctgattatggaagtagtatgtgtgtatatgataatgtatttgcagatatagga
gatgaacagagtattgaacagagtctatcaacattttcatctcatatgacgaatatagta
tctatattacaaaacgtaacagcagactctttagttatatttgacgagttaggagcagga
acagaccctgttgaaggagctgcccttgcaatagcagtattagaagatataaattctgta
ggagctaaatgtatagctaccactcactatagtgagcttaaaaattatgctcttactaaa
ccaggtgtagaaaatgcagcagttgaatttgatatagaaactttaagcccaacatataag
ttacttataggtgttcccggaaaatcaaatgcgtttgagatttctagaaaacttgggcta
agtgattatgtgatttcacgtgctaaagaatatataaatacagaaaacatagctttagaa
gatgtgttacagaatgttgaaaagaatagaatcaaagcagtagaagatagagaagaagct
gaaagattaaaagaagagattgaaaaactgaaagtagagtatgacgaaaaacttgaaaaa
ttggtcagtcaaagagataagatgattgaaaaagctaaatcagaagcattttcaattata
agacaagctaaagaagaagtagatattataataaaagaacttagaaatcttgaacaagaa
agagcttcaaaagaaaagaatcgtaagatagaagaacttagaaaagaattgaccagctct
atgggaagtcttcagccaacagtaaaaagtatgatagttccaaaggtatcaaataaggag
ataaaagacttaaagccaggtgaagaagttaaggtaataactttaaatcaaaatggtagt
gtagtttcagtagataaaaagagaaaagaagcagtagtgcaaattggtataatgaagatg
actctaccttttaaatctttacaaaaaacacgcaaagatgtttcaacaaatgtaactaaa
tcaacgagaaacattataaggtcaaaatctggtagtgtaaaaaatgaagttgaccttaga
gggttaaacctagaagaagctataatggaagtagaaaagtatcttgatgatgcatatgtg
gcaggtttagagtctgtaacagtaatacatggaataggcacaggagtattaaaagcaggg
ctacaagacattttaagaagaaatagacatgtaaaatcacaacgaggtggtcaatatgga
gaaggtggagcaggagtaacaattgttaaattaaaataa
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