Clostridioides difficile CD196: CD196_0709
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Entry
CD196_0709 CDS
T00997
Name
(GenBank) putative transcription antiterminator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdc03000
]
CD196_0709
Transcription factors [BR:
cdc03000
]
Prokaryotic type
Other transcription factors
BglG family
CD196_0709
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
Mga
HTH_11
HTH_Mga
PTS_IIB
HTH_DeoR
HTH_7
HTH_29
SpoIIID
MerR
Motif
Other DBs
NCBI-ProteinID:
CBA61354
UniProt:
A0A0H3MZZ3
LinkDB
All DBs
Position
860911..862896
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AA seq
661 aa
AA seq
DB search
MSMTYMDPRVFLILEMVLEEDTNTLEQFSNVLGVSTRTIRNYINQINRELKGGIAKIVKN
EKGTYSIRIEDESKLIEIVNFNRGKLSNFINLNSPDERINYVLDILTMTNNPITIDDLAE
EICIGRTTLIKDLKKADRILAEYDLELKRKPNIGMILVGEEMDIRLLILDRLYENYIDVL
ENVNQINLVKDYDIECLRDELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKI
DKRFEVIRCSDEYTLGLKLKALLEKIFNIVLNEKETIFLTMPLIGRKAPSTKLALSSIKI
NDSVKEVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKE
RYTFPYSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTG
LGTAQLIRIKIGKILGESVEVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDLDVPIFRVN
ALFNEESIKKEIENAILLKNSINLKSIKKIEKNIPFIGKLIEEDKFFILNKSTFMENLED
MLEKLVHKGIIDIEFKKKVLKREKKSSTALDNYIALPHSVNTNGENLYLSFGILEKPVVW
DTKEIRIIILMIIPDKNVDSTDLIIKSYEEVLEVGRDKKMIEELAKVKSFDEFYKIITKR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgacttatatggaccctagggtttttttgattttagaaatggtgttagaagaa
gacacaaatactctagaacaattttcaaatgttttgggtgttagtactaggactatcaga
aactatataaaccagattaatcgagaattaaaaggtggtattgctaaaatagttaaaaat
gaaaaaggtacatatagtataagaattgaggatgaaagtaaattaattgagattgtaaat
tttaatagaggaaagctatcaaattttataaatttaaattcacctgatgaaagaataaat
tatgttcttgatattttaactatgaccaacaatccaattaccatagatgatttggctgaa
gagatatgtataggaagaacaacattaataaaggatttaaaaaaagcagacagaatttta
gctgaatatgatttagaattaaaaaggaagccaaatataggtatgattttagttggtgaa
gaaatggatataagattattaatccttgatagattgtatgaaaattatattgatgtcttg
gaaaacgttaatcagataaatttagttaaagattatgatattgaatgtcttagagatgaa
ttaaaaaagttgtttaaaaaagaagaactctacataacagaacaggtcttgagagatgtt
gaaagatatataatcatgtctgtcttaagaaatctaaatgggtacaaatttgaaaagata
gataagagatttgaagtgataagatgttcagatgaatatactttaggattaaagctcaaa
gctttattggaaaagatatttaatatagttttaaatgaaaaagaaaccatatttttgaca
atgccattaataggtagaaaagctcctagtacaaaattagcacttagcagtataaagata
aatgatagcgtaaaggaagttgtagatgaagtaactagttttttattagagacctcaggg
attgattttaaagaagataaaaagcttatagaaaatttggaatatcacttgtattttgca
cttaatagaatgagattcaacataagggtaaaaaatcctcttttacaagaaataaaggaa
agatatacatttccatatagtgttgcaaagatagctgcaatgataattgaggaaaagttt
gacttgaaaatatgtgaccacgaaataggatatatagcattacattttggaagttatttt
gaaaaaaattcaagaaaagttctaaatgtaaatagggtagctgttgtttgtggaacaggt
cttgggactgcacaacttattagaataaagataggaaaaatacttggagaaagtgtagaa
gtaaatactttttctgatatagaagctaaagctaatttagatttattaaagtattatgat
ttagtatttacaacagtagatttcaaaacagacttagatgttccaatttttagagtaaat
gcgttatttaatgaagaaagtataaagaaagagatagaaaatgcaatacttttgaaaaat
agtataaatcttaagtctataaaaaagattgaaaaaaatatcccttttataggtaaatta
attgaagaggataagttctttatattgaataagagtacgtttatggaaaatttagaagat
atgttagaaaaattagttcataaaggaattattgatatagagttcaaaaaaaaggtatta
aaaagagaaaagaaatcttcaacagcattagataattatatagcattgcctcactcagtt
aatactaatggggaaaatctttatctgtcatttggaatattagaaaaaccagtggtttgg
gatacaaaggaaattagaataataatattgatgataattccagataagaatgtagatagt
acagacctgataataaaaagttatgaagaagtacttgaagtagggagagataaaaaaatg
atagaagaacttgctaaagtaaaatcatttgatgaattttataaaataattaccaagagg
aggtaa
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