Clostridioides difficile CD196: CD196_0894
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Entry
CD196_0894 CDS
T00997
Name
(GenBank) putative ABC transporter, permease/ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_0894
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_0894
Transporters [BR:
cdc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CD196_0894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
ABC_membrane_3
SMC_N
RsgA_GTPase
AAA
AAA_14
NTPase_1
AAA_30
AAA_23
AAA_16
TsaE
DUF87
MMR_HSR1
AAA_28
AAA_29
nSTAND3
AAA_18
ABC_membrane_2
DUF6659
LiaI-LiaF-TM_PspC
MobB
DO-GTPase2
ATP_bind_1
cobW
AAA_5
AAA_24
DUF6594
Motif
Other DBs
NCBI-ProteinID:
CBA61702
UniProt:
A0A0H3N9N8
LinkDB
All DBs
Position
1068986..1070848
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AA seq
620 aa
AA seq
DB search
MSEKRIDEQDIEVLSFEDGMSAEKVKDAKKTTKRLLKYMAKQKFKILIIFISVLISSALT
VLAPMVMGKAIDQLFNGIKTAVQTGTKFSVNFSTMGGIVSILLGLYLISAVFIYIQQYIM
SGVAQNLVLSMRKDLSDKLNKLPLKYYDSHKKGETLSIVTNDLEKVADSLQEGLMQLITA
VVTVVGSIVMMISISVPLTIVSAITLLVSLGITVVIARKSQERFSENQKALGELNSNIEE
IFTGQIVVKAFSKEKDTIRNFKILNQNLYNASRRAQFSSYAISPIIRFINLIGYVIIAVV
GGIFASTGAMTLGSIQAFIQYVNQASEPTTEISYIVNMLQAAIASAERVFTVMDEVEEIK
DEESSKVISMPKGKVQFEHVKFGYSDDFILMKDININLNAGDKIAIVGPTGAGKTTLVNL
LMRFYEIQGGRITIDGVNIKDLKRGELRTMFGMVLQDTWLFNGSIKENIAYSKSDATMDE
IVRAAKSARVDHFIRTLPQGYDTILTEDASNLSQGQKQLLTIARAILSDPSVLILDEATS
SVDTRTEVEIQKAMNNLMKGRTSFVIAHRLSTIRDADLILVMKEGTIIEQGSHKELIEKK
GFYEELYNSQFSSEYDEEVV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaagaatagatgaacaagatatagaagtacttagttttgaagatggcatg
tcagcagaaaaagttaaggatgcaaaaaaaactactaagagattattaaaatatatggca
aaacaaaagtttaaaatattaattatttttatttcagtattgataagttcagcgcttaca
gttttagcacctatggttatgggaaaagctattgaccaactatttaatggaataaaaact
gcagtccaaacaggtacaaaattcagtgtgaattttagtactatgggggggatagtatca
atacttctagggttgtacttaattagtgcagtatttatatatattcaacagtatattatg
tcaggagttgcacaaaatctagttcttagcatgagaaaagatttaagtgataaactcaat
aaacttcctcttaagtactatgattctcataaaaagggggaaacacttagtatagtaaca
aatgatttagaaaaagtagcagatagtttacaagaaggattaatgcaacttattacagca
gtagttacagtagttggttctattgtaatgatgataagtataagtgtaccacttacaata
gtatcagctataacattacttgtttcattgggtattactgttgtaattgcaagaaaatca
caagaaagattctctgaaaatcaaaaggcactaggagagttaaatagcaatatagaagag
atatttactggtcaaatagtggttaaagcatttagtaaagaaaaggatactataagaaac
tttaaaatattaaatcaaaatctttataatgcaagtagaagagcacagttttcgtcatat
gcaatatctccaattattagatttataaacctaattggctatgttattatagcagttgta
ggtgggatatttgcatcaactggagcaatgactcttggtagtatacaagcgtttattcaa
tatgtaaatcaagcatcagagcctactacagaaatatcttatattgtaaatatgcttcaa
gcagcaatagcatctgcagagagagtttttacagttatggatgaggtggaagagataaag
gatgaagaatcttcaaaggttattagcatgcctaaaggtaaagtacaatttgagcatgtt
aaatttggatatagtgatgattttattcttatgaaagatattaatatcaatctaaatgca
ggagacaagattgcaattgttggacctacaggagctggaaagacaactcttgtaaattta
cttatgagattttatgagatacaaggtggaagaattactattgatggtgttaatataaaa
gacttaaagcgtggagaacttagaactatgtttggtatggttcttcaagatacatggctg
tttaatggaagtataaaagaaaatattgcatatagtaagtcagatgccacaatggatgaa
attgtaagagcagcaaaatcagcaagagtagaccattttataaggactttaccacaaggg
tatgacactatattgactgaggatgcttctaatctatctcaaggtcaaaagcaacttcta
acaattgccagggcaatactttcagacccatcagtattgattcttgatgaagcaacatct
agtgtagatactagaacagaggtagaaattcaaaaggcaatgaataacttgatgaaggga
agaactagttttgttattgcacatagattatcaactattcgagatgctgatttaatatta
gtaatgaaagaaggcactattattgaacaaggaagccataaggaacttattgaaaagaaa
ggattctatgaagaactttataatagtcaattttcaagtgaatatgatgaagaagttgta
tga
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