Clostridioides difficile CD196: CD196_0917
Help
Entry
CD196_0917 CDS
T00997
Symbol
addB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0917 (addB)
Enzymes [BR:
cdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD196_0917 (addB)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CD196_0917 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6730
Fer2_2
Motif
Other DBs
NCBI-ProteinID:
CBA61745
UniProt:
A0A0H3N0K7
LinkDB
All DBs
Position
1105495..1108962
Genome browser
AA seq
1155 aa
AA seq
DB search
MGLRFVLGRSGSGKSTYILDEIKKEAQKNETTSIILLVPEQYTFEAENRVSKLFLGKEKD
KYLRVRVLSFKTLSNIVFSQVGGLTDVNINSSGKAMMVYRAIEDVSEELNVFSKSKSQSG
FVSSITDMISEMKQYNISPEMLENISGELDNETLSLKLKDISKIYNSFEGKLHENYVDAQ
DMLTSLASKIELSSYLDGACVYIDEFTGFTPNQYNVIKSILNKSKSVNISLTVDDINYIG
YSKSDMFSRTKFTYSKLTQLCNEEGIKILPQVNLNTGVIKRFEKVKELQHLERFYNAYPY
KIYSNPTENIKIKEFNNLYSEVEEIAREIVHLVRDKNVRYRDITIATRDLNRYDFLVHSI
FNEYNIPNFIDKKREAKSNPIVILIISALEMKNRRYGYETMFRYLKSGLIGIDNDDINLL
ENYVLANGIKGKKWFDEKWDYRITQSLSGQESEFELELKEKINEIKNRVLEPIVILQEKL
RGKNRVKEICRYIYEFLLDINMPETIENLIVNFKDKGELDVANQYSQVWDIVVDILDQMV
ELMGDEIISLEKFIKLITLGFDEYELGLVPPSIDQVLVSSVDRMKNPDTKYLYLVGTTDG
VFPLITKDSGILSDNDRESLGNKGIEVDIDSKTRSFEEQFLVYKALTSTSKNLTITYPIS
DHEGKTLRPSIIISRLKKIFPNIENKSYLVEENKSTDKDILKKITVKSPTFNELINVIKN
YDSDDYNTEEINSIWLDIYRYYLKDEIYSSITKKVIKGLSYTNQVHKIEEKKIRSLYKSN
SLSISRLEKYAECPFAYFIQYGLKAKKRKEYSFTPPDLGTFIHNILDRFSKELLQDNLTW
RDIDEKYIELKIGIIVDEIILKIPGYILNSSERYKYLAYRLKNMLTTAITIISQQIKQGS
FEPIDYEVKFGDNGKYPPIKMVLENGQEVSLIGQIDRVDEFEEGENKYIRIIDYKSGNKS
ISLTEIYYGLQLQLLVYLDAILESAKDEDININPAAILYCRINNPIAKFNEDKDDEEIQE
AILKELRMKGLVVKDSHIVKEMDKSLIDGERKNSLVIPVGLTKDGNVGKSTSAISYEDFK
LLRKYVRHAIKDLCEEMLSGEIRIAPYKHKDGTSCDFCDYSTICQFDSTIKDNKYKNLNN
KSNEEIIKMMKGDVN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgggacttaggtttgtattaggtagaagtggaagtggaaaatccacctatatactagat
gagattaaaaaagaagctcaaaaaaatgaaacgacatcaattatacttttagttccagaa
cagtacacatttgaggctgaaaatagagtaagtaagctattcttaggaaaagaaaaagat
aagtatctaagagttagggtacttagctttaagacactaagtaatatagttttttctcaa
gtaggaggattgacagatgtaaatataaattctagtggaaaagcaatgatggtatataga
gctattgaagatgtaagtgaagaattaaatgtgttttcaaaatcaaaatcgcagtctggt
tttgtaagctcaattacagatatgatatcagaaatgaaacaatacaatataagccctgaa
atgttagaaaatatatctggagaattggataatgaaactttaagtttaaaattaaaagat
ataagtaaaatatataattcttttgaagggaaattgcatgaaaattatgtagatgctcaa
gatatgttaacttcattggcaagtaaaattgaattaagcagttatttagatggagcttgt
gtttatatagatgaatttacaggttttacaccaaatcagtacaatgtcataaagagtata
ttaaataagtctaaaagtgttaatatctctttgactgtagatgatatcaactatattggg
tacagtaaatctgatatgttttctagaacgaaatttacttattcaaaattgactcaattg
tgcaacgaagaaggcataaaaatattgccacaagtaaatttaaacacaggtgttataaaa
agatttgaaaaagttaaggaattacagcacctagaaagattttataatgcttatccatat
aaaatatattcaaatccaactgaaaatataaagataaaagagtttaacaatttatattca
gaggtggaagagatagccagagaaattgtacatttagttagagataagaatgtaagatat
agagatataaccattgctacaagagatttaaatagatatgattttttagtacactctata
tttaatgaatataatataccaaactttatagataagaagagagaggcaaaaagtaatcca
atagttattttaattatttcagctttagaaatgaagaatagacgatatgggtatgaaact
atgtttaggtatttaaaaagtggacttataggaattgataatgatgatataaatttacta
gaaaattatgtgttggctaatgggattaaaggtaaaaaatggtttgatgaaaaatgggat
tatagaataacacaaagtctttcaggtcaagaaagtgaatttgaactggaattaaaagaa
aaaataaatgaaataaaaaatagagtattagagcctatagtaattttacaagaaaaatta
agaggaaaaaatagagtaaaagaaatctgtagatatatatatgaatttttattagatata
aatatgccagaaactatagaaaatttaatagtaaattttaaggataaaggggaacttgat
gttgcaaatcaatactcacaagtttgggacatagtagtggacatattagaccaaatggtg
gaacttatgggtgatgaaataatttctttagaaaaatttataaaattaataaccttaggc
tttgatgaatatgaattaggactggttcctcctagtatagaccaggtacttgtaagtagt
gtggatagaatgaaaaatccagacacgaaatatttatacctagttggaactactgatggt
gtgtttccactgattacaaaggatagtggaatattgagtgataatgatagggaaagtctt
ggaaacaaaggaatcgaagttgatattgatagtaagactaggagttttgaagaacagttt
cttgtatataaagctcttacttcgacatctaagaatttaaccataacatatccaatatca
gaccatgaaggtaaaacgcttagaccatcaataattatatcaagacttaagaagatattt
ccaaatatagaaaataaaagttatttagtggaagaaaataaaagcactgataaagatata
cttaaaaaaataacggttaaatcccctacatttaatgaacttataaacgtaataaaaaat
tatgacagtgatgattacaatacagaagagattaatagtatttggttagatatatatagg
tactatttaaaagatgaaatctatagttctataacaaaaaaagttataaaaggtcttagt
tatactaatcaagttcataagattgaagagaaaaaaataaggtcattgtataaaagtaat
tctcttagcatatctaggcttgaaaaatatgctgaatgtccatttgcttattttatacaa
tatggtctaaaagcaaaaaagcgtaaagagtattcatttacaccaccagatttaggaact
tttattcataatattttagataggttttcaaaagaacttttacaagataatttaacttgg
agagatattgatgaaaaatatatagaattaaagataggtataatagttgatgaaataatt
ttaaagataccaggatatatattaaatagttctgagaggtataaataccttgcatataga
ttaaagaatatgttgacaactgctataactataattagtcagcaaataaaacaaggttca
tttgaaccaatagattatgaagttaaatttggcgacaatggaaaatatccacctataaaa
atggtgttagaaaatggacaagaagtaagtttaattggacaaatagatagagttgatgaa
tttgaagaaggagaaaataaatatataagaataatagattataagtcaggcaataagtcc
ataagtctaacagaaatatattatggtctacaattacaattacttgtgtatttagatgca
atccttgaaagtgcaaaggatgaagatataaatataaatccagctgcaatactatattgt
agaataaataatccaatagcaaaatttaatgaagataaagatgatgaagaaatacaagaa
gcaatattaaaagaacttagaatgaaggggcttgtagtaaaagactctcacatagttaaa
gagatggataaatcattaatagatggagaaaggaaaaactctttagtaataccagtaggt
cttactaaggatggaaatgtaggtaaaagtacttcagcaataagctatgaggatttcaaa
ctgcttagaaaatatgtaaggcatgctataaaggatttatgtgaagaaatgttaagtgga
gaaatacgtatagctccatataaacataaagatggaacatcatgtgacttttgtgattac
tctactatatgtcagtttgattcaactataaaagataacaagtataaaaatttaaataat
aagagtaatgaagagataataaaaatgatgaaaggagatgttaattag
DBGET
integrated database retrieval system
