Clostridioides difficile CD196: CD196_0919
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Entry
CD196_0919 CDS
T00997
Symbol
sbcD
Name
(GenBank) nuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0919 (sbcD)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD196_0919 (sbcD)
Archaeal homologous recombinant proteins
CD196_0919 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF359
Motif
Other DBs
NCBI-ProteinID:
CBA61749
UniProt:
A0A0H3N0G7
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All DBs
Position
1112835..1114046
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AA seq
403 aa
AA seq
DB search
MRFIHTSDWHLGKSLEGHSRIEEQAKFCEEFIKIVESNEIDMVIIAGDVYDTSNPPAQAE
KLFYQTVSRLANNGQRCVLIISGNHDNPERLSAITPLAHEQGILIYGYPLSATIEAKYKG
FEITYATQGCTKLNINGENIVIATLPYPSEKRLNEVFSSEDEFEKQKNYSEKVGDIFRSL
EENFRSDTINIAVSHIFVIGGESTESERPIQLGGSFLVERKDLPEKAQYTALGHLHKQQK
ASERLNAYYSGSPLQYSKDERAYTKGAYIVDIKAGEKPIIEDVYFNNYKPIEVFKCNGIE
EALDICEQNQDREIWSYFEINTDEIISQNEIKKMKELLKDIIEIKPIITSCYEQESVDIK
EKSMAELFREFYSFSKGVEPKGELMDLFLDIISEEGESADETN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagatttattcatacatcagattggcatctagggaagtccctagaaggccattctaga
attgaggaacaagcaaagttttgtgaggaatttataaaaatagtagaatcaaatgaaata
gatatggttataattgctggagatgtatatgatacttctaatcccccagcacaagcagaa
aaactattttatcagactgtatcaagacttgccaataatggtcagaggtgtgtattaata
atttcaggaaatcatgataatccagagagactttctgcaataacacctctagcacatgaa
caggggatacttatatatggttatccattaagtgctacgatagaagctaagtataaaggg
tttgaaataacatatgcaactcagggatgtacaaaactgaatataaatggagaaaatatt
gtgattgctacattaccttatccaagtgaaaaaagattaaatgaagttttttcaagtgaa
gatgagtttgagaaacaaaaaaattattctgaaaaggtaggagatatatttagaagttta
gaagaaaattttagaagtgatactataaatatagccgtatcacatatatttgtaataggt
ggagagagtactgaatcagaaagacctatacaattaggtggaagttttttagttgaaaga
aaagatttgccagaaaaggctcaatatactgcactaggtcatttacataaacaacaaaaa
gcttccgaacgtttaaatgcatactattctggttctccacttcaatatagcaaggatgaa
agagcgtataccaaaggggcatacatagtggatataaaagctggagaaaaaccaataatt
gaagatgtatattttaataattacaaacctatagaagtatttaaatgtaatggaatagaa
gaagcactagatatatgtgagcaaaatcaagatagagagatttggtcatattttgaaata
aatactgatgagataatatcacagaatgaaattaaaaaaatgaaggaactattaaaagac
ataatagaaataaaaccaataataacatcttgttatgaacaagaaagtgtagatataaaa
gaaaagtctatggcagagttgtttagagagttctattcttttagtaaaggtgtagagcca
aaaggagaacttatggatttatttctagatataataagtgaagaaggtgaatcagcagat
gagaccaattag
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