Clostridioides difficile CD196: CD196_0988
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Entry
CD196_0988 CDS
T00997
Name
(GenBank) putative transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
CD196_0988
Enzymes [BR:
cdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CD196_0988
Peptidoglycan biosynthesis and degradation proteins [BR:
cdc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CD196_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Lysozyme_like
SLT_4
SRR
Motif
Other DBs
NCBI-ProteinID:
CBA61875
UniProt:
A0A0H3N0R4
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All DBs
Position
1187986..1188540
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AA seq
184 aa
AA seq
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MNSKKVLILSIFIILFGALLMESKVIHKFLYPKKYSEYVEKYSKEFNLDENIVYSVIKAE
SKFNSSAVSKKEAKGLMQILDITRDWGAEELNLKNVDIFDPETNIRLGCWYLSKLYKEFG
KLDLVIAAYNGGSGNVKKWLENNEYSKDGENLHDIPFKQTSKYVEKVKNNYEHYNKIYGK
KGKN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagtaagaaagtattgattctatctatttttataatcttatttggggcactatta
atggaaagcaaagtaatacataaatttttatatcctaaaaaatattcagagtatgtagaa
aagtattcaaaagaatttaatttagatgaaaatatagtttacagtgttattaaagccgaa
agtaagtttaatagttctgctgtttcaaaaaaggaagcaaaaggattaatgcaaatatta
gatataactagagattggggagcagaggaactaaatttaaaaaatgtggatattttcgac
ccagagactaatataagacttggctgttggtatttaagtaagttatacaaagaatttggt
aaattagatttagtgatagctgcatataatggtggttcaggtaatgtgaaaaaatggtta
gaaaataatgaatatagtaaagatggcgaaaatctacatgatataccttttaagcaaact
tcaaaatatgtagaaaaagtaaaaaataattacgaacattataataagatatatggcaag
aaaggaaaaaactaa
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