Clostridioides difficile CD196: CD196_1114
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Entry
CD196_1114 CDS
T00997
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02024
Quorum sensing
cdc03060
Protein export
cdc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CD196_1114 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CD196_1114 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD196_1114 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdc02044
]
CD196_1114 (ffh)
Enzymes [BR:
cdc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CD196_1114 (ffh)
Secretion system [BR:
cdc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CD196_1114 (ffh)
Eukaryotic Sec-SRP protein
CD196_1114 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
AAA_30
AAA_33
APS_kinase
MeaB
6PF2K
CPSase_L_D1
DUF3829
Motif
Other DBs
NCBI-ProteinID:
CBA62118
UniProt:
A0A0H3N132
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All DBs
Position
1316393..1317751
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AA seq
452 aa
AA seq
DB search
MIFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERC
VGQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGK
LGGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAI
KNANDLVIIDTAGRLHIDEVLMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEAL
GVDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDV
LSLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVK
DQLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNASRKKRIAKGSGTSVQDVNRLIKQL
NEMKKMMKMFAGSQKSMKKRGGLGGLPFLNKI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgaaggattgtctgataaactacaaggggcatttagtaagttaaaatctaaa
ggaaaacttacagaagtagatgtaaaaaatgctatgagagaagttaaacttgctcttctt
gaggcagatgttaactttaaagtagttaaagatttcataaaaaaagttcaagagagatgt
gttggacaagaagttatgcaaagcttaactccagctcagcatgtaatcaaaattgtaaat
gaagagcttacaagtttaatgggagatgtacaaagtaaagtaatgatttcctcaaagcct
cctacaattttaatgatggttggattgcaaggtgcaggtaagactactacagcaggaaaa
cttggaggatattttaaaaagcaaggtaaaaaacctctattagtagcttgtgatatttat
agaccggcagctataaagcaacttcaagttgttggagaaaaattggatatacctgtattc
aatatgggagataaagaaaatccagtaaatattgcgaaagcaggtttaagccatgcgatt
aaaaatgctaatgatttagttattatagatacagctggtagacttcatatagatgaagta
cttatggctgagttaaagtctattaaatcagaagttaagccacatgagatacttttggtt
gtagattctatgacaggtcaagatgctgtaaatgttgcagaaagcttcaatgaggcactt
ggtgttgatggagtagtattaactaaattggatggagatactagaggtggtgctgcactt
tcaataagagcagttacacaaaagcctataaaatttatggggatgggagaaaagctagat
gatatagaacctttccacccagatagaatggcatcaagaatattaggtatgggagatgtc
ttaagtttaatagaaaaagcacaagaaaatatagacttagagaaagctaaagaattagag
caaaaaattaaaaaacaagagcttgattttgaagatttcttacaacaaatggaacaaata
caaaatatgggacctcttgacaagatacttggtatgatacctggtatgggaaatgtaaaa
gaccaacttggagatgtagatttgaatggcaaagaaatgaagagaacaaaagccataatt
cagtcaatgactacatatgagagaagaaacccaggagtattaaatgcttcaagaaagaaa
agaatagctaagggcagtggaactagtgtacaagatgtaaatagacttataaaacaactt
aatgaaatgaaaaaaatgatgaagatgtttgctggttcacaaaagagtatgaagaaaagg
ggcggcttaggcggtttaccttttttaaataaaatataa
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