Clostridioides difficile CD196: CD196_1175
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Entry
CD196_1175 CDS
T00997
Name
(GenBank) putative RNA-binding protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00920
Sulfur metabolism
cdc01100
Metabolic pathways
cdc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
CD196_1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_1175
Enzymes [BR:
cdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
CD196_1175
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
CD196_1175
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
CD196_1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBA62232
UniProt:
A0A0H3N5X0
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All DBs
Position
1381166..1382176
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AA seq
336 aa
AA seq
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MKKMLNKMRMKIMMNNMDSIINYIYEGDYFIVTSHISPDGDNVGSTLSMYYTLKNLGKNV
YYVLDDEAPLNLRFLVEGVKIYKSNEFNMKNYSLIALDCGDKMRICVSDEIKNNASKLIC
IDHHASNDSYGDLNYVDIDASSTCELVYNLLVRFQQTKDINIINEDIATCLYTGLVTDTG
NFSYSNVHASSFEMAKNLLVLGAQKNTIIQNIYQSNSSDYYKLLGEALKGLEIFDSKVSS
IVLTQDMMNRNNISFNDVDGITTYTRDIKGIEVGILFKEKKQNEIKVSFRSKNYVDVSEI
AKLFGGGGHVRAAGCTIRDSIDNAKKMVLEAVLKSI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgctcaacaaaatgaggatgaaaattatgatgaataatatggatagtatt
ataaactatatttatgagggtgactattttatagttacctctcatatcagtccagatgga
gacaatgttggttctacactttcaatgtattatacattgaagaatttaggaaaaaatgta
tattatgtacttgatgatgaagctccattaaatttaaggtttttggttgaaggtgtaaaa
atctataagtctaatgaatttaatatgaagaactattctttaattgcacttgattgtggg
gataagatgagaatatgtgtgagtgatgaaatcaaaaataatgcatcaaaattaatctgt
attgaccatcatgctagtaatgattcatatggagatttaaattatgtagatattgatgca
tcttctacatgtgaactagtttataatttattggttagatttcagcaaacaaaagatatt
aatattataaatgaagatatagcaacatgtttatatacaggtcttgtaactgatactgga
aacttttcgtattcaaatgtacatgcaagtagttttgaaatggcaaaaaatttacttgtt
ttaggtgcacaaaaaaatactataatacaaaatatatatcaaagcaattcttctgattat
tataaattattaggagaagctctaaaaggtttggagatatttgattcaaaggtatctagt
atagttttaactcaagacatgatgaatagaaataatattagctttaatgatgttgatgga
ataacaacatatacaagagatataaaaggtatagaagttggaattttatttaaagagaaa
aaacaaaatgaaattaaagtgagttttaggtcaaaaaattatgttgatgtaagtgaaata
gccaagttatttggcggtggtggtcatgtaagggctgctggatgtactattagagatagt
attgataatgcaaagaaaatggtactagaggcagtgttaaaatcaatttaa
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