Clostridioides difficile CD196: CD196_1345
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Entry
CD196_1345 CDS
T00997
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_1345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_1345
Transporters [BR:
cdc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CD196_1345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
Glyco_hydro_26
AAA_23
AAA_29
AF_1314_N
RsgA_GTPase
AAA_RNF213_3
DUF7399
YxiF
Motif
Other DBs
NCBI-ProteinID:
CBA62557
UniProt:
A0A0H3N1P2
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All DBs
Position
1568702..1570525
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AA seq
607 aa
AA seq
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MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYT
IGKVVDIIDIDTYSKSIFLKGIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFL
KFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQLITGILNILMTFIMMFVLSPI
LTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS
VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGVLASKDIITIGVIAS
FLSYVRQFTRPLNELANLFNTLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNL
NSHFVKGEIELKDVSFSYDSKKKILDNINLKIKAGTSNAIIGETGSGKTTIINLITNFYH
IDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK
IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIAT
EAKIQEAINNLTYGKTSIIIAHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRN
ILLTQGK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttaagtactggaaatcaaaaggtcagtagattaaagaaaaaagaaaagcctaaa
gattttaaaaaaacgtttaaaagaatttttatgtactttaaaaaagataagaagattact
agatttatttttttgctagtaataattgattcaattatatcaactgtaataccatatact
attggaaaggtagttgacataatagatatcgatacttattcaaaatccattttcttaaaa
ggaataattattttactttcattttatataattgagttttcagttaaactgtctaagggg
atatgtacagctagattatctcaaagtatagttaaagaaatgagaagtaatttattttta
aaatttaaaaatctaccaataaccttttttgataaaagttctactggagatattatgagt
agagtgacaaatgatgttgataatatcagtacaggaatatcaaattcattagtacagtta
attacaggaatcttaaacatattgatgacttttattatgatgtttgtattaagcccaatt
ttaacattttgcagtgtaatattaataccgatagtaatgtttgtgagtaattttattgca
aagagaactagagttttttttaagcaacaacaagttgagttgggaaaactaaatgcacat
attgaagaaatgatatcaaacataaatgtagtaaaatcttttaattatgaaagaaaatct
gtaaatgattttaaagaagtcaatgatagacttctaaatatttcccttaaatcgcaaatt
tacacttctcttttaatgcctattatgaatgtgattagtaatataggatttgcaactata
tgtattataggaggtgttcttgcatctaaagatattataaccataggggttatagctagt
tttttaagttatgtaagacaattcacaagacctttaaatgaattagcaaatctatttaat
acattactttcagccatagctggatgtgaaagagtttttgaaattatagatgaacaagaa
gagcaagaagtgcataacatgtttaaaagtgagattaacgataataaagatggtaattta
aactctcattttgtaaagggagaaattgagcttaaagatgtaagtttttcttatgattca
aaaaagaaaattttagataatataaacctaaaaatcaaagctggcacatcaaatgccatc
ataggagagacaggaagtggaaaaacaacgattataaatctaattacaaatttttatcat
atagatgaaggaagtatatttttagatggtaaggatatatactctattaacagaaactat
ttgagaacttgttttggagtagttccacaagaaggttatatattcaatgatacagttatg
gaaaatataaggtatggaaatctggaggctactgatgaagaagttatatatgctagtaaa
atagcaaatgcacataaatttatagttaaaatgcgtgaaggatatagtactgtattatcg
gataggggtgaagatttaagtgaaggtcaaaaacaattaataagtattgctagagcagta
ttaaaaaatgctccaatacttattttggatgaggctacaagtaacatagatatagcaaca
gaagctaaaattcaagaagcaataaataatttaacttatggaaagacaagtataattata
gctcatagattaagtaccatatcaaattgtgataatataatagttttagaaaatggtaga
attgtggaatcaggaaatcataaagaattgataaaattaaagggacattattatagaaac
atattattgacacagggaaaataa
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